RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 IFT80Q9P2H3 777 aaPredicted RBP21.65■■□□□ 1.06
SNIP1-203ENST00000493916 GPN3Q9UHW5 284 aaPredicted RBP21.65■■□□□ 1.06
SNIP1-203ENST00000493916 LOC105369274A0A096LPK9 316 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 LOC102723532A0A0G2JNH3 316 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 FAM159BA6NKW6 160 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 KIF2AO00139 706 aaPredicted RBP21.64■■□□□ 1.05
SNIP1-203ENST00000493916 ENO2P09104 434 aaPredicted RBP21.64■■□□□ 1.05
SNIP1-203ENST00000493916 HIST1H2AGP0C0S8 130 aaPredicted RBP21.64■■□□□ 1.05
SNIP1-203ENST00000493916 HIST1H2ADP20671 130 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 ITGAXP20702 1163 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 CCND1P24385 295 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 GPX6P59796 221 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 FAM214AQ32MH5 1076 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 THEMIS2Q5TEJ8 643 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 PRAMEF13Q5VWM6 474 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 MRPL14Q6P1L8 145 aaKnown RBP21.64■■□□□ 1.05
SNIP1-203ENST00000493916 AGTRAPQ6RW13 159 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 TMEM207Q6UWW9 146 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 MBOAT1Q6ZNC8 495 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 OR4N4Q8N0Y3 316 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 ANKRD7Q92527 254 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 ZNF592Q92610 1267 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 FKBP10Q96AY3 582 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 VPS39Q96JC1 886 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 HIST1H2AHQ96KK5 128 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 HIST1H2AJQ99878 128 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 H2AFJQ9BTM1 129 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 LRRC1Q9BTT6 524 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 POPDC3Q9HBV1 291 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 NDOR1Q9UHB4 597 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 FER1L5A0AVI2 2057 aa21.64■■□□□ 1.05
SNIP1-203ENST00000493916 CXorf49A8MYA2 514 aaPredicted RBP21.63■■□□□ 1.05
SNIP1-203ENST00000493916 B8ZZF3 427 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 RFPL1O75677 317 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 C1QAP02745 245 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 ALAS2P22557 587 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 HRH2P25021 359 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 EMP3P54852 163 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 TAS2R39P59534 338 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 SLC7A5Q01650 507 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 NFATC3Q12968 1075 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 COL9A2Q14055 689 aaPredicted RBP21.63■■□□□ 1.05
SNIP1-203ENST00000493916 PRTGQ2VWP7 1150 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 FAM69BQ5VUD6 431 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 MLIPQ5VWP3 458 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 C3orf62Q6ZUJ4 267 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 NKAPQ8N5F7 415 aaKnown RBP21.63■■□□□ 1.05
SNIP1-203ENST00000493916 CPNE1Q99829 537 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 SGPP1Q9BX95 441 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 SLC22A11Q9NSA0 550 aa21.63■■□□□ 1.05
SNIP1-203ENST00000493916 NOVA2Q9UNW9 492 aaKnown RBP21.63■■□□□ 1.05
SNIP1-203ENST00000493916 TLN1Q9Y490 2541 aaKnown RBP21.63■■□□□ 1.05
SNIP1-203ENST00000493916 COL6A6A6NMZ7 2263 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ESYT3A0FGR9 886 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 HYKKA2RU49 373 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 PABPN1LA6NDY0 278 aaKnown RBP21.62■■□□□ 1.05
SNIP1-203ENST00000493916 H0YGG7 62 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 PIAS1O75925 651 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 PIM1P11309 404 aaPredicted RBP21.62■■□□□ 1.05
SNIP1-203ENST00000493916 SAT1P21673 171 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 MAGEA4P43358 317 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ARF3P61204 181 aaPredicted RBP21.62■■□□□ 1.05
SNIP1-203ENST00000493916 POU4F1Q01851 419 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 SBSNQ6UWP8 590 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 CCDC25Q86WR0 208 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 MMGT1Q8N4V1 131 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 OR2Y1Q8NGV0 311 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 C9orf43Q8TAL5 461 aaPredicted RBP21.62■■□□□ 1.05
SNIP1-203ENST00000493916 OR2A5Q96R48 311 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 TRIM54Q9BYV2 358 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 SYNPO2LQ9H987 977 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ZDHHC18Q9NUE0 388 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ABCF3Q9NUQ8 709 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 CUEDC1Q9NWM3 386 aaPredicted RBP21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ARL15Q9NXU5 204 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 TXNDC16Q9P2K2 825 aa21.62■■□□□ 1.05
SNIP1-203ENST00000493916 ZNF462Q96JM2 2506 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 HAT1O14929 419 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 CNOT3O75175 753 aaKnown RBP21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ALBP02768 609 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 FOLR3P41439 243 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ZNF460Q14592 562 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 SLC9A5Q14940 896 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 PPP1R3AQ16821 1122 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ADCK2Q7Z695 626 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 RAB43Q86YS6 212 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 CEP97Q8IW35 865 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 CSNK1A1LQ8N752 337 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 MNS1Q8NEH6 495 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ATL1Q8WXF7 558 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 FBXL8Q96CD0 374 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ABHD17AQ96GS6 310 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 RBBP8Q99708 897 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 ATG10Q9H0Y0 220 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 SLC26A1Q9H2B4 701 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 WDR54Q9H977 334 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 LRRC4CQ9HCJ2 640 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 TMEM184CQ9NVA4 438 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 IKZF3Q9UKT9 509 aa21.61■■□□□ 1.05
SNIP1-203ENST00000493916 MKRN2OSH3BPM6 223 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms