RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CNTN5O94779 1100 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PAPSS2O95340 614 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CXCL14O95715 111 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PROZP22891 400 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SFNP31947 248 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GPX4P36969 197 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CHRNB3Q05901 458 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NFYCQ13952 458 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TMEM44Q2T9K0 475 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ARL13AQ5H913 290 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PRAMEF13Q5VWM6 474 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF57Q68EA5 555 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ENOSF1Q7L5Y1 443 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 OTOP1Q7RTM1 612 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GALNT5Q7Z7M9 940 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GLCCI1Q86VQ1 547 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PAQR7Q86WK9 346 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 OR9I1Q8NGQ6 314 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 OTULINQ96BN8 352 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 YIPF6Q96EC8 236 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ITCHQ96J02 903 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 QRFPRQ96P65 431 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SLITRK1Q96PX8 696 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 REEP2Q9BRK0 252 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF385DQ9H6B1 395 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 C3orf18Q9UK00 162 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 YARS2Q9Y2Z4 477 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NFASCO94856 1347 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 EFCAB7A8K855 629 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CDC7O00311 574 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 FFAR3O14843 346 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DCLK1O15075 740 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PMM2O15305 246 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MSH4O15457 936 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 GPR42O15529 346 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TGFB1I1O43294 461 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 FZD6O60353 706 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PRKRAO75569 313 aaKnown RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TPOP07202 933 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 HLA-DMAP28067 261 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MAP2K3P46734 347 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 GLRBP48167 497 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CLCN7P51798 805 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 LIMK1P53667 647 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SPCS3P61009 180 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SNRPEP62304 92 aaKnown RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PSMC6P62333 389 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 HTRA4P83105 476 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DPYSL3Q14195 570 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 IRF3Q14653 427 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TIGD6Q17RP2 521 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 AAK1Q2M2I8 961 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TFDP3Q5H9I0 405 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PRAMEF19Q5SWL8 479 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 LCN1P1Q5VSP4 162 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DBX2Q6ZNG2 339 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SSX6Q7RTT6 188 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 C12orf40Q86WS4 652 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 FAM178BQ8IXR5 827 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MCOLN2Q8IZK6 566 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 KDF1Q8NAX2 398 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 NLGN4YQ8NFZ3 816 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ITFG1Q8TB96 612 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DNAJB14Q8TBM8 379 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MYRFLQ96LU7 910 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MSTO1Q9BUK6 570 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ZCCHC4Q9H5U6 513 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 XPNPEP3Q9NQH7 507 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TJP2Q9UDY2 1190 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PTPRDP23468 1912 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 LOC390937A0A1W2PQ73 354 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 OR6C74A6NCV1 312 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 E7ESA3 106 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ADRB1P08588 477 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PRKAR1AP10644 381 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PRF1P14222 555 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SLC2A4P14672 509 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 UBA1P22314 1058 aaKnown RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CPN2P22792 545 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TGM4P49221 684 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CLCNKAP51800 687 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ATP12AP54707 1039 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 KCNJ10P78508 379 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SOX4Q06945 474 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 CDH18Q13634 790 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MAPKAPK3Q16644 382 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ALG11Q2TAA5 492 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 HKDC1Q2TB90 917 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ATP13A5Q4VNC0 1218 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TREML2Q5T2D2 321 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 RAET1GQ6H3X3 334 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SLC27A4Q6P1M0 643 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ARHGAP11AQ6P4F7 1023 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ZCCHC12Q6PEW1 402 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 OTOP2Q7RTS6 562 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 KANSL1Q7Z3B3 1105 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SAMD7Q7Z3H4 446 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms