RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 HIST2H2ACQ16777 129 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TUBB8Q3ZCM7 444 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SLC45A4Q5BKX6 768 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SIRPB2Q5JXA9 342 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ATF7IP2Q5U623 682 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SFMBT2Q5VUG0 894 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 NOTUMQ6P988 496 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 C1orf186Q6ZWK4 172 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ASCL5Q7RTU5 278 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TMTC1Q8IUR5 882 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 NME8Q8N427 588 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SPATA6LQ8N4H0 392 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 DCLK2Q8N568 766 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MRPL43Q8N983 215 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 C11orf65Q8NCR3 313 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MAPK1IP1LQ8NDC0 245 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TNIP2Q8NFZ5 429 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 RDM1Q8NG50 284 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 OR10T2Q8NGX3 314 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 URGCPQ8TCY9 931 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ST6GAL2Q96JF0 529 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 FAM20AQ96MK3 541 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 PHF7Q9BWX1 381 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TRIM6Q9C030 488 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 MAF1Q9H063 256 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 GLT8D2Q9H1C3 349 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 NDST4Q9H3R1 872 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 FZD8Q9H461 694 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 TUFT1Q9NNX1 390 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ANKEF1Q9NU02 776 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 SMC3Q9UQE7 1217 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 DLGAP4Q9Y2H0 992 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 OR2W1Q9Y3N9 320 aa2.98□□□□□ -1.93
PTCD3-218ENST00000493430 LSM4Q9Y4Z0 139 aaKnown RBP2.98□□□□□ -1.93
PTCD3-218ENST00000493430 ZFHX2Q9C0A1 2572 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 SMIM28A0A1B0GU29 152 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 A0A1B0GUA9 196 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 SMIM1B2RUZ4 78 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 LYPLA2O95372 231 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 BAG4O95429 457 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 PRAMEF12O95522 483 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 CAVIN2O95810 425 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 XBP1P17861 261 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 FCARP24071 287 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 CHRNB4P30926 498 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 HOXD13P35453 343 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 GPD2P43304 727 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 NAMPTP43490 491 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 NUMBP49757 651 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ISL1P61371 349 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 HTR4Q13639 388 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 GIT2Q14161 759 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TFDP1Q14186 410 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF234Q14588 700 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 MAPK6Q16659 721 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 C2orf68Q2NKX9 166 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 HERC4Q5GLZ8 1057 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF667Q5HYK9 610 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 GGNBP1Q5YKI7 109 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 JADE1Q6IE81 842 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 GALNT17Q6IS24 598 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 Q6ZS52 159 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 HAUS6Q7Z4H7 955 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZBTB8OSQ8IWT0 167 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 NELFCDQ8IXH7 590 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 SLC35F3Q8IY50 421 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZBTB2Q8N680 514 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TDRD5Q8NAT2 981 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 LSM14AQ8ND56 463 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TMEM161BQ8NDZ6 487 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 OR2AK2Q8NG84 335 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 HCAR2Q8TDS4 363 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TCP11Q8WWU5 503 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 RAD54LQ92698 747 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 PIGTQ969N2 578 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 JAKMIP2Q96AA8 810 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 FAM122AQ96E09 287 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 SCRN2Q96FV2 425 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 EEF2KMTQ96G04 330 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF354BQ96LW1 612 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ZNF599Q96NL3 588 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 LRRC3BQ96PB8 259 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 RTP3Q9BQQ7 232 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 CBWD1Q9BRT8 395 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TRIM9Q9C026 710 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 PPP1R3EQ9H7J1 279 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 UPF2Q9HAU5 1272 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 MMP25Q9NPA2 562 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 BEX4Q9NWD9 120 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 FBXW11Q9UKB1 542 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 ADAM28Q9UKQ2 775 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 NOL7Q9UMY1 257 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 NDRG2Q9UN36 371 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 PRSS21Q9Y6M0 314 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 CNOT1A5YKK6 2376 aaKnown RBP2.97□□□□□ -1.93
PTCD3-218ENST00000493430 KNL1Q8NG31 2342 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 TRPM6Q9BX84 2022 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 CCDC88CQ9P219 2028 aa2.97□□□□□ -1.93
PTCD3-218ENST00000493430 SNRNP200O75643 2136 aaKnown RBP2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms