RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CCKBRP32239 447 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 GRIA3P42263 894 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 CASP2P42575 452 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 NAGLUP54802 743 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 INHBCP55103 352 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 GFERP55789 205 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 WDR4P57081 412 aaKnown RBP11.12□□□□□ -0.63
LSM2-214ENST00000493387 INSM1Q01101 510 aaPredicted RBP11.12□□□□□ -0.63
LSM2-214ENST00000493387 IRF8Q02556 426 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 CLCQ05315 142 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 LAPTM5Q13571 262 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 PUM1Q14671 1186 aaKnown RBP eCLIP11.12□□□□□ -0.63
LSM2-214ENST00000493387 TBCCQ15814 346 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 FBXO48Q5FWF7 155 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 PAGE2BQ5JRK9 111 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 TMTC4Q5T4D3 741 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 KIAA1614Q5VZ46 1190 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 ATG9BQ674R7 924 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 FIGLAQ6QHK4 219 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 NXPE4Q6UWF7 544 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 GOLGA7Q7Z5G4 137 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 ARHGAP22Q7Z5H3 698 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 TMPRSS12Q86WS5 348 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 SLITRK4Q8IW52 837 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 RAB3IL1Q8TBN0 382 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 MGARPQ8TDB4 240 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 UBE2E3Q969T4 207 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 ATP6V1E2Q96A05 226 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 ESAMQ96AP7 390 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 TCTN2Q96GX1 697 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 AIF1LQ9BQI0 150 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 PLCD4Q9BRC7 762 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 DPH7Q9BTV6 452 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 NTMT1Q9BV86 223 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 DRC3Q9H069 523 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 ZNF768Q9H5H4 540 aaKnown RBP11.12□□□□□ -0.63
LSM2-214ENST00000493387 IPPKQ9H8X2 491 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
LSM2-214ENST00000493387 DLL3Q9NYJ7 618 aa11.12□□□□□ -0.63
LSM2-214ENST00000493387 OR2A25A4D2G3 310 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 LRRC14BA6NHZ5 514 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 SLC9B1P1A6NJY1 282 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 CDH1P12830 882 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 CCNG1P51959 295 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 PKNOX1P55347 436 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 PPP1CAP62136 330 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 HSD11B2P80365 405 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 GALNT1Q10472 559 aaPredicted RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 LCP2Q13094 533 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 RBBP7Q16576 425 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 HIST2H2ACQ16777 129 aaPredicted RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 ZC3H12BQ5HYM0 836 aaKnown RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 SNAP47Q5SQN1 464 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 PHF19Q5T6S3 580 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 LIPJQ5W064 366 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ATG16L1Q676U5 607 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ZNF425Q6IV72 752 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 DHRS13Q6UX07 377 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ZNF574Q6ZN55 896 aaPredicted RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 TMPRSS11BQ86T26 416 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 TRIM73Q86UV7 250 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 KRT78Q8N1N4 520 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 GALNT15Q8N3T1 639 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 C19orf47Q8N9M1 422 aaKnown RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 OR4K1Q8NGD4 311 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ADAMTS14Q8WXS8 1223 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 NEIL2Q969S2 332 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 THAP11Q96EK4 314 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 WDR34Q96EX3 536 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 PTCD3Q96EY7 689 aaKnown RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 SLC41A2Q96JW4 573 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 CCDC74BQ96LY2 380 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ZNF382Q96SR6 550 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 EFCAB11Q9BUY7 163 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 MECRQ9BV79 373 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 NOL11Q9H8H0 719 aaKnown RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 EML4Q9HC35 981 aaKnown RBP11.11□□□□□ -0.63
LSM2-214ENST00000493387 PDE7BQ9NP56 450 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 KLHL3Q9UH77 587 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 BTRCQ9Y297 605 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 ASB1Q9Y576 335 aa11.11□□□□□ -0.63
LSM2-214ENST00000493387 PIEZO1Q92508 2521 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 IGHV5-51A0A0C4DH38 117 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 WDR91A4D1P6 747 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 TMEM114B3SHH9 223 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 H7BY64 318 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
LSM2-214ENST00000493387 CLDN9O95484 217 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 MSL3P1P0C860 447 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 EBLN1P0CF75 366 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 FGF3P11487 239 aaPredicted RBP11.1□□□□□ -0.63
LSM2-214ENST00000493387 JUPP14923 745 aa11.1□□□□□ -0.63
LSM2-214ENST00000493387 EZRP15311 586 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms