RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZCCHC2Q9C0B9 1178 aaKnown RBP12.67□□□□□ -0.38
HDAC3-213ENST00000492506 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 IL17CQ9P0M4 197 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 PADI2Q9Y2J8 665 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 LOC285095A0A1B0GVY8 99 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 MGAT4DA6NG13 374 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 MATN2O00339 956 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 LDB2O43679 373 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 SGTAO43765 313 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 ZG16O60844 167 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 CNOT3O75175 753 aaKnown RBP12.66□□□□□ -0.38
HDAC3-213ENST00000492506 PMPCBO75439 489 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 CIB2O75838 187 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 IPO13O94829 963 aaKnown RBP12.66□□□□□ -0.38
HDAC3-213ENST00000492506 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 CBSLP0DN79 551 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 HLA-DPA1P20036 260 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 KDELR1P24390 212 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 SERPINB3P29508 390 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 PBLDP30039 288 aaPredicted RBP12.66□□□□□ -0.38
HDAC3-213ENST00000492506 PRDX3P30048 256 aaKnown RBP12.66□□□□□ -0.38
HDAC3-213ENST00000492506 CBSP35520 551 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 MTTPP55157 894 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 AP2B1P63010 937 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 KRT72Q14CN4 511 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 FNBP1LQ5T0N5 605 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 FAM151BQ6UXP7 276 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 PPP1R32Q7Z5V6 425 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 MCEMP1Q8IX19 187 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 ZADH2Q8N4Q0 377 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 CLEC1AQ8NC01 280 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 OR2L2Q8NH16 312 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 BTBD10Q9BSF8 475 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 YIPF2Q9BWQ6 316 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 GLOD4Q9HC38 313 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 AGPAT4Q9NRZ5 378 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 P4HTMQ9NXG6 502 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 SERTAD3Q9UJW9 196 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 ACSL5Q9ULC5 683 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 OSGIN2Q9Y236 505 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
HDAC3-213ENST00000492506 GLYATL1P3A0A0U1RQE8 302 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 C9J4A7 227 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 E7EQ34 232 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 SMAPO00193 183 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 BTN3A3O00478 584 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 HCRTR1O43613 425 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 CDH16O75309 829 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 PROSCO94903 275 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 PVRP15151 417 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 AGXTP21549 392 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 S100A1P23297 94 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 SPAM1P38567 509 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 NEK2P51955 445 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 PER3P56645 1201 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 FOXL2P58012 376 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 ZDHHC20Q5W0Z9 365 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 KDELC1Q6UW63 502 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 CDHR3Q6ZTQ4 885 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-213ENST00000492506 LILRA3Q8N6C8 439 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-213ENST00000492506 OR2Y1Q8NGV0 311 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 TM9SF4Q92544 642 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 CGREF1Q99674 301 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 ECSITQ9BQ95 431 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 TRABDQ9H4I3 376 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 Q9H521 79 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 RHBDL2Q9NX52 303 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 NDE1Q9NXR1 346 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 UBP1Q9NZI7 540 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 WHRNQ9P202 907 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 ZFP69BQ9UJL9 534 aa12.65□□□□□ -0.38
HDAC3-213ENST00000492506 PTRH2Q9Y3E5 179 aaKnown RBP12.65□□□□□ -0.38
HDAC3-213ENST00000492506 PCNX1Q96RV3 2341 aa12.65□□□□□ -0.39
HDAC3-213ENST00000492506 A0A087X0T9 212 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 C3orf70A6NLC5 250 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-213ENST00000492506 BTN3A1O00481 513 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 PEX12O00623 359 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 PRPF4O43172 522 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC3-213ENST00000492506 BUD23O43709 281 aaKnown RBP12.64□□□□□ -0.39
HDAC3-213ENST00000492506 KLHL41O60662 606 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 IGHEP01854 428 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 UMODP07911 640 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 HBQ1P09105 142 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 SLC35G4P0C7Q5 338 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 FAM228BP0C875 321 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 EDN3P14138 238 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 TAC1P20366 129 aa12.64□□□□□ -0.39
HDAC3-213ENST00000492506 ITGA3P26006 1051 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms