RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CRYL1Q9Y2S2 319 aa8.36□□□□□ -1.07
NUP50-217ENST00000491860 HS3ST3B1Q9Y662 390 aa8.36□□□□□ -1.07
NUP50-217ENST00000491860 NFS1Q9Y697 457 aa8.36□□□□□ -1.07
NUP50-217ENST00000491860 MDC1Q14676 2089 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 A0A1W2PPV9 198 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 A0A1W2PQ72 361 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 DYTNA2CJ06 578 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PABPN1LA6NDY0 278 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 ANKUB1A6NFN9 424 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CTSVO60911 334 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 NIPSNAP2O75323 286 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 EIF2S1P05198 315 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CCND1P24385 295 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 SKIV2L2P42285 1042 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 KCNJ1P48048 391 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 GLRBP48167 497 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 FNTAP49354 379 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CLCN7P51798 805 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PNLIPRP1P54315 467 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PER3P56645 1201 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 FAM53BQ14153 422 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 NR6A1Q15406 480 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 LONRF1Q17RB8 773 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PRTGQ2VWP7 1150 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CRB2Q5IJ48 1285 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 ICE2Q659A1 982 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 RPUSD3Q6P087 351 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 KIRREL2Q6UWL6 708 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 ISLR2Q6UXK2 745 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 RIPOR1Q6ZS17 1223 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 NDUFAF7Q7L592 441 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PCGF5Q86SE9 256 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 REXO1L1PQ8IX06 675 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 FAM20CQ8IXL6 584 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 KBTBD2Q8IY47 623 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CSNK1A1LQ8N752 337 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PRELID2Q8N945 189 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 ST6GALNAC3Q8NDV1 305 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 OR11G2Q8NGC1 345 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 STT3BQ8TCJ2 826 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 INPP5DQ92835 1189 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 ZNF669Q96BR6 464 aaPredicted RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 THAP11Q96EK4 314 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CABS1Q96KC9 395 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 BARD1Q99728 777 aaKnown RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 FAM167BQ9BTA0 163 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 TGIF2Q9GZN2 237 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 SOX17Q9H6I2 414 aaPredicted RBP8.35□□□□□ -1.07
NUP50-217ENST00000491860 RIC8BQ9NVN3 520 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 SLC5A6Q9Y289 635 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 CENPEQ02224 2701 aa8.35□□□□□ -1.07
NUP50-217ENST00000491860 POLEQ07864 2286 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ABCA12Q86UK0 2595 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 NSG1A0A0A6YYJ2 146 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ARHGEF33A8MVX0 844 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 GFYI3L273 518 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 PGRMC1O00264 195 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 CES2O00748 559 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 KIF5CO60282 957 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CBX6O95503 412 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 TTC4O95801 387 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 C8GP07360 202 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 HEXBP07686 556 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CTSBP07858 339 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 EDN3P14138 238 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 MCM3P25205 808 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 PSMB5P28074 263 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 GRK3P35626 688 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 COILP38432 576 aaPredicted RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 OR1D4P47884 311 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 AVPR1BP47901 424 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 VPS41P49754 854 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 RGS4P49798 205 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 EMP2P54851 167 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 RPS15AP62244 130 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 SKP1P63208 163 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 KLC1Q07866 573 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ILF2Q12905 390 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 SP140Q13342 867 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 MFAP5Q13361 173 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ZNF169Q14929 603 aaPredicted RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ACSBG2Q5FVE4 666 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 THEMIS2Q5TEJ8 643 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 NIPAL1Q6NVV3 410 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CCDC137Q6PK04 289 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CENPUQ71F23 418 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CAND1Q86VP6 1230 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 PPIL6Q8IXY8 311 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CISD2Q8N5K1 135 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 GPATCH11Q8N954 259 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms