RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LDB1Q86U70 411 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 VSTM4Q8IW00 320 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 TAB3Q8N5C8 712 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 HMGCLL1Q8TB92 370 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 ALG3Q92685 438 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 C14orf79Q96F83 325 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 SIGLEC12Q96PQ1 595 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 NPAS2Q99743 824 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 TREX2Q9BQ50 279 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 CARD6Q9BX69 1037 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 ENKD1Q9H0I2 346 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 TSPAN10Q9H1Z9 355 aaPredicted RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 LRRC40Q9H9A6 602 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 RIC8BQ9NVN3 520 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
USF1-206ENST00000491629 TRPC4Q9UBN4 977 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 PCDHA3Q9Y5H8 950 aa12.55□□□□□ -0.4
USF1-206ENST00000491629 IGKV1-8A0A0C4DH67 115 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 MAN1A2O60476 641 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 DIAPH2O60879 1101 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
USF1-206ENST00000491629 FKBP9O95302 570 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 C1orf105O95561 183 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 GRIA1P42261 906 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 MAGEA1P43355 309 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 ACVR1Q04771 509 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 TRIM14Q14142 442 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 MUM1Q2TAK8 710 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 ZNF766Q5HY98 468 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
USF1-206ENST00000491629 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 OR52K1Q8NGK4 314 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 ASZ1Q8WWH4 475 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 ZFYVE21Q9BQ24 234 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 TGIF2Q9GZN2 237 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
USF1-206ENST00000491629 SLC39A10Q9ULF5 831 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
USF1-206ENST00000491629 MEMO1Q9Y316 297 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 EML6Q6ZMW3 1958 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
USF1-206ENST00000491629 FLNAP21333 2647 aaKnown RBP12.54□□□□□ -0.4
USF1-206ENST00000491629 IGHV3-20A0A0C4DH32 117 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 ADAM10O14672 748 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 RPN2P04844 631 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 HEXBP07686 556 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 CAPN3P20807 821 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 CXCR2P25025 360 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 TLE4Q04727 773 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 ZNF33BQ06732 778 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 LANCL3Q6ZV70 420 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 SPPL2CQ8IUH8 684 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 OR4L1Q8NH43 312 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 THAP3Q8WTV1 239 aaPredicted RBP12.53□□□□□ -0.4
USF1-206ENST00000491629 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 GPR137Q96N19 417 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 PPP1R2P1Q96PQ5 205 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 SPOCK3Q9BQ16 436 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 DPH7Q9BTV6 452 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 ACAT2Q9BWD1 397 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 MCCC2Q9HCC0 563 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
USF1-206ENST00000491629 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
USF1-206ENST00000491629 ABCA4P78363 2273 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 OR2W5A6NFC9 320 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 GOLGA6L19H0YKK7 550 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 P2RX6O15547 441 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 SEC24DO94855 1032 aaPredicted RBP12.52□□□□□ -0.41
USF1-206ENST00000491629 APOA4P06727 396 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.41
USF1-206ENST00000491629 CTNNA2P26232 953 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 SMSP52788 366 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 EMP3P54852 163 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
USF1-206ENST00000491629 HSF1Q00613 529 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 RBPJQ06330 500 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 ABHD17BQ5VST6 288 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 LRRC8BQ6P9F7 803 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 AFTPHQ6ULP2 937 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 PAQR7Q86WK9 346 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 BEST3Q8N1M1 668 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 RAD51AP1Q96B01 352 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 MMABQ96EY8 250 aaPredicted RBP12.52□□□□□ -0.41
USF1-206ENST00000491629 OR2A5Q96R48 311 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 FERMT1Q9BQL6 677 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 TUBB6Q9BUF5 446 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 YIPF2Q9BWQ6 316 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 RAB11FIP5Q9BXF6 653 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms