RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF571Q7Z3V5 609 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 ZC3H7AQ8IWR0 971 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 HORMAD2Q8N7B1 307 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 IPMKQ8NFU5 416 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 CABS1Q96KC9 395 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 TEKT5Q96M29 485 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 SLC6A16Q9GZN6 736 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 HAUS4Q9H6D7 363 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 TRPS1Q9UHF7 1281 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 ALG6Q9Y672 507 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 WIPF1O43516 503 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 PRMT3O60678 531 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 EPOP01588 193 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 TPM2P07951 284 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 CD53P19397 219 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 ZFP36L2P47974 494 aaKnown RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 Q5PR19 223 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 CDKAL1Q5VV42 579 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 FBXW10Q5XX13 1052 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 C16orf47Q6ZP98 133 aaPredicted RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 OR13C4Q8NGS5 318 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 MMABQ96EY8 250 aaPredicted RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 PLEKHF2Q9H8W4 249 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 MKKSQ9NPJ1 570 aaPredicted RBP12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
EXOSC3-207ENST00000490516 IGLV3-16A0A075B6K0 115 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 CCL22O00626 93 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 LIN7AO14910 233 aaPredicted RBP12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 S1PR4O95977 384 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 PRSS56P0CW18 603 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 CD9P21926 228 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC26A3P40879 764 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 TAS2R40P59535 323 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 PDK1Q15118 436 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 FLYWCH1Q4VC44 716 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 MAP7D3Q8IWC1 876 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 SHISA5Q8N114 240 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 ZDHHC3Q9NYG2 299 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 Q9UFV3 132 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
EXOSC3-207ENST00000490516 ARID1AO14497 2285 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 SONP18583 2426 aaKnown RBP12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 C2orf81A6NN90 581 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 KDM1AO60341 852 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 CRLF1O75462 422 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ERVK-10P10266 1014 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ITGALP20701 1170 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 PSMB5P28074 263 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 UQCRC1P31930 480 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 UBXN1Q04323 297 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 PRTGQ2VWP7 1150 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 WDR53Q7Z5U6 358 aaPredicted RBP12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 OR52N2Q8NGI0 321 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ELMO1Q92556 727 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ZUFSPQ96AP4 578 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 Q96MF0 132 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 CYTH2Q99418 400 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 TTYH2Q9BSA4 534 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 CDCP1Q9H5V8 836 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 PNPLA3Q9NST1 481 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 ARHGAP21Q5T5U3 1957 aa12.88□□□□□ -0.35
EXOSC3-207ENST00000490516 OR2W5A6NFC9 320 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 NPIPA2E9PIF3 369 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 NPIPA3F8WFD2 350 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 PPP1R12AO14974 1030 aaPredicted RBP12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 PRPF4O43172 522 aaKnown RBP eCLIP12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 ARHGEF9O43307 516 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 AGTP01019 485 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 ANXA5P08758 320 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 GLI4P10075 376 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms