RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 TCRBV9S1A1TA0A576 114 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 ARGFXA6NJG6 315 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 H0YGG7 62 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 HAT1O14929 419 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 EIF3HO15372 352 aaKnown RBP eCLIP17.33■□□□□ 0.368e-9■□□□□ 10.7
COL9A3-214ENST00000490398 STATHP02808 62 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 EIF2S1P05198 315 aaKnown RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 C8GP07360 202 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 IL2P60568 153 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 ARF3P61204 181 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 CKAP4Q07065 602 aaKnown RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 COLEC12Q5KU26 742 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 MRPL14Q6P1L8 145 aaKnown RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 AGTRAPQ6RW13 159 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 PTRH1Q86Y79 214 aaKnown RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 PROKR1Q8TCW9 393 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 MCOLN3Q8TDD5 553 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 ABHD17AQ96GS6 310 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 CCDC138Q96M89 665 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 ZFYVE21Q9BQ24 234 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 DPH2Q9BQC3 489 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 RAB17Q9H0T7 212 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 SLC25A18Q9H1K4 315 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 CAB39LQ9H9S4 337 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 ZDHHC18Q9NUE0 388 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 IFT80Q9P2H3 777 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-214ENST00000490398 SRPK3Q9UPE1 567 aa17.33■□□□□ 0.36
COL9A3-214ENST00000490398 SEC16AO15027 2179 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 FAM159BA6NKW6 160 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 B8ZZF3 427 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 C9J4A7 227 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 H7BY64 318 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 PYCARD-AS1I3L0S3 204 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 MASP2O00187 686 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 CDC7O00311 574 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 NDC80O14777 642 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 DSCR3O14972 297 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 SLC16A5O15375 505 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 FAM155BO75949 473 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 PDGFAP04085 211 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 GMPRP36959 345 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 OR1D4P47884 311 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 SP140Q13342 867 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 NAE1Q13564 534 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 GRM7Q14831 915 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 HKDC1Q2TB90 917 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 TCTE1Q5JU00 501 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 THEMIS2Q5TEJ8 643 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 LRRC8EQ6NSJ5 796 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 C8orf74Q6P047 294 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 SHISA5Q8N114 240 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 ALKBH8Q96BT7 664 aaKnown RBP17.32■□□□□ 0.36
COL9A3-214ENST00000490398 VPS39Q96JC1 886 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 C10orf90Q96M02 699 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 PRAP1Q96NZ9 151 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 OR2A5Q96R48 311 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 UNKQ9C0B0 810 aaKnown RBP17.32■□□□□ 0.36
COL9A3-214ENST00000490398 ADNPQ9H2P0 1102 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 RHOJQ9H4E5 214 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 LRRC4CQ9HCJ2 640 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 TLK1Q9UKI8 766 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 PTRH2Q9Y3E5 179 aaKnown RBP17.32■□□□□ 0.36
COL9A3-214ENST00000490398 MAU2Q9Y6X3 613 aa17.32■□□□□ 0.36
COL9A3-214ENST00000490398 COL6A6A6NMZ7 2263 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 A0A1B0GX78 115 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 HYKKA2RU49 373 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 ZNF839A8K0R7 811 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 P2RX6O15547 441 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 SRPX2O60687 465 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 WISP3O95389 354 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 UMODP07911 640 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PLA2G2AP14555 144 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 ZNF37AP17032 561 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 OTX2P32243 289 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 MAGEA4P43358 317 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PMS2P54278 862 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PPP1R3AQ16821 1122 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 WHAMMP3Q1A5X7 153 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PRTGQ2VWP7 1150 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PRAMEF13Q5VWM6 474 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 SBSNQ6UWP8 590 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 C3orf62Q6ZUJ4 267 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 ADCK2Q7Z695 626 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 PYCR2Q96C36 320 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 MESP1Q9BRJ9 268 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 SGPP1Q9BX95 441 aa17.31■□□□□ 0.36
COL9A3-214ENST00000490398 CCDC177Q9NQR7 707 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 UTP6Q9NYH9 597 aaKnown RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 HELZ2Q9BYK8 2649 aaKnown RBP17.31■□□□□ 0.36
COL9A3-214ENST00000490398 TENM4Q6N022 2769 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 NPEPPSL1A6NEC2 478 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 GUCA1CO95843 209 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 ONECUT2O95948 504 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 ARSFP54793 590 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 ABATP80404 500 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 CAV1Q03135 178 aa17.3■□□□□ 0.36
COL9A3-214ENST00000490398 ATP1A4Q13733 1029 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms