RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 IL2P60568 153 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 PDIA2Q13087 525 aaKnown RBP16.68■□□□□ 0.26
SEC13-218ENST00000490283 TEDDM1Q5T9Z0 273 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 FAM45BPQ6NSW5 357 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 MAATS1Q7Z4T9 603 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 HPS6Q86YV9 775 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 FAM45AQ8TCE6 357 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 EEF1AKMT1Q8WVE0 214 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 COL26A1Q96A83 441 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 NACC2Q96BF6 587 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 LINGO1Q96FE5 620 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 TRIM54Q9BYV2 358 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 PCBD2Q9H0N5 130 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 PARVBQ9HBI1 364 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 ZNF304Q9HCX3 659 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 CDC14AQ9UNH5 594 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 TEX264Q9Y6I9 313 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 LOC102723532A0A0G2JNH3 316 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 FAM187AA6NFU0 413 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 H0YGG7 62 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 K7EM74 188 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 TXNDC9O14530 226 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 DPM1O60762 260 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 ONECUT2O95948 504 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 ALPPP05187 535 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 CCND1P24385 295 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 HRH2P25021 359 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 GABRB3P28472 473 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 IMPA1P29218 277 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 CDKN2DP55273 166 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 ARF3P61204 181 aaPredicted RBP16.67■□□□□ 0.26
SEC13-218ENST00000490283 OCA2Q04671 838 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 MGAT5Q09328 741 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 FRG1Q14331 258 aaKnown RBP16.67■□□□□ 0.26
SEC13-218ENST00000490283 RBM20Q5T481 1227 aaKnown RBP16.67■□□□□ 0.26
SEC13-218ENST00000490283 HECTD2Q5U5R9 776 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 STEAP4Q687X5 459 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 PAQR3Q6TCH7 311 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 PAQR7Q86WK9 346 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 ANKMY2Q8IV38 441 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 METTL27Q8N6F8 245 aaPredicted RBP16.67■□□□□ 0.26
SEC13-218ENST00000490283 CSNK1A1LQ8N752 337 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 FBXO36Q8NEA4 188 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 PWWP2AQ96N64 755 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 SLC26A1Q9H2B4 701 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 P4HTMQ9NXG6 502 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 SNX24Q9Y343 169 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 MAU2Q9Y6X3 613 aa16.67■□□□□ 0.26
SEC13-218ENST00000490283 SEC16AO15027 2179 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 NRP2O60462 931 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 CEACAM4O75871 244 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 FBLP22087 321 aaKnown RBP16.66■□□□□ 0.26
SEC13-218ENST00000490283 OR1D4P47884 311 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 EMP3P54852 163 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 TBPL1P62380 186 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 YBX1P67809 324 aaKnown RBP16.66■□□□□ 0.26
SEC13-218ENST00000490283 RELAQ04206 551 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 NKG7Q16617 165 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 DCAF10Q5QP82 559 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 GARNL3Q5VVW2 1013 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 PRAMEF13Q5VWM6 474 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 ZNF425Q6IV72 752 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 FBXO42Q6P3S6 717 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 TRMT10BQ6PF06 316 aaKnown RBP16.66■□□□□ 0.26
SEC13-218ENST00000490283 FDCSPQ8NFU4 85 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 MVB12AQ96EY5 273 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 MLXIPLQ9NP71 852 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 SLC22A11Q9NSA0 550 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 NSMCE4AQ9NXX6 385 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
SEC13-218ENST00000490283 SLC17A6Q9P2U8 582 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 PDE10AQ9Y233 779 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 VWA7Q9Y334 891 aa16.66■□□□□ 0.26
SEC13-218ENST00000490283 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEC13-218ENST00000490283 IGKV1-8A0A0C4DH67 115 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 AGPSO00116 658 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 CNOT3O75175 753 aaKnown RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 SNRNP200O75643 2136 aaKnown RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 ZIC2O95409 532 aaPredicted RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 PDGFAP04085 211 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 UMODP07911 640 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 ANXA5P08758 320 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 MMP11P24347 488 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 RPL21P46778 160 aaKnown RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 ILF2Q12905 390 aaKnown RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 RBBP7Q16576 425 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 NDUFA9Q16795 377 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 PRTGQ2VWP7 1150 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 VWA5B1Q5TIE3 1220 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 IRAK1BP1Q5VVH5 260 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 AGTRAPQ6RW13 159 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 PPP1R32Q7Z5V6 425 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 C17orf64Q86WR6 236 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 ZBED8Q8IZ13 594 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 SPATA4Q8NEY3 305 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 ALKBH8Q96BT7 664 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms