RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 ZNF425Q6IV72 752 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 WDR74Q6RFH5 385 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 NXPE4Q6UWF7 544 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 EFL1Q7Z2Z2 1120 aaKnown RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 TMPRSS11BQ86T26 416 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 SYVN1Q86TM6 617 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 FAM129CQ86XR2 697 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 OR4F6Q8NGB9 312 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 OR4K1Q8NGD4 311 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 MOCOSQ96EN8 888 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 PTCD3Q96EY7 689 aaKnown RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 CHMP6Q96FZ7 201 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 SARGQ9BW04 601 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 ILKAPQ9H0C8 392 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 ACTR8Q9H981 624 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 MID1IP1Q9NPA3 183 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 ACSS2Q9NR19 701 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 SEMA5BQ9P283 1151 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 SH2B3Q9UQQ2 575 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 TSC22D4Q9Y3Q8 395 aa12.87□□□□□ -0.35
TRAIP-210ENST00000489948 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-210ENST00000489948 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 KCNE1BA0A087WTH5 132 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 IGKV1-8A0A0C4DH67 115 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 A0A1B0GTL3 188 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TLCD2A6NGC4 264 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ISM1B1AKI9 464 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 H0YIV9 168 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PPP6CO00743 305 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TNFSF14O43557 240 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TGDSO95455 350 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 C9P02748 559 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CDH1P12830 882 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 JUPP14923 745 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ALOX15P16050 662 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 AMD1P17707 334 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TSPAN8P19075 237 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 MPSTP25325 297 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 GSTM2P28161 218 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PRDX3P30048 256 aaKnown RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CCR8P51685 355 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ERVPABLB-1P60509 514 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 REEP5Q00765 189 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 FOXK2Q01167 660 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 IRF8Q02556 426 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ZNF33BQ06732 778 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CHIT1Q13231 466 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 LAPTM5Q13571 262 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 SF1Q15637 639 aaKnown RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PERM1Q5SV97 790 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TTC19Q6DKK2 380 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ARMC6Q6NXE6 501 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ASCL5Q7RTU5 278 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PIP4P1Q86T03 277 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 AFAP1L2Q8N4X5 818 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ZNF781Q8N8C0 355 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 WDR48Q8TAF3 677 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 IFI44Q8TCB0 444 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 STON2Q8WXE9 905 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ATP6V1E2Q96A05 226 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 SEC16BQ96JE7 1060 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 FAR2Q96K12 515 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CDC6Q99741 560 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CCDC3Q9BQI4 270 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 CHRNA10Q9GZZ6 450 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 NT5DC2Q9H857 520 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 SLC6A20Q9NP91 592 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 MRPS30Q9NP92 439 aaKnown RBP12.86□□□□□ -0.35
TRAIP-210ENST00000489948 TMEM184CQ9NVA4 438 aa12.86□□□□□ -0.35
TRAIP-210ENST00000489948 OR2A25A4D2G3 310 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 AZIN1O14977 448 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 TOX3O15405 576 aaPredicted RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 B4GAT1O43505 415 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 UROSP10746 265 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 HGFP14210 728 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 TYRP1P17643 537 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CD22P20273 847 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CXCR2P25025 360 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CD1CP29017 333 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 CSF2RBP32927 897 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 ACADVLP49748 655 aa12.85□□□□□ -0.35
TRAIP-210ENST00000489948 RPL14P50914 215 aaKnown RBP12.85□□□□□ -0.35
TRAIP-210ENST00000489948 OR1D5P58170 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms