RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 UPK3BL1B0FP48 263 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LINC00587B1AMM8 73 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 UPK3BL2E5RIL1 263 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PLA2G10O15496 165 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MED7O43513 233 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ORC5O43913 435 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KIAA0513O60268 411 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 VPS4BO75351 444 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 WDR47O94967 919 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 APOL3O95236 402 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CFBP00751 764 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PGRP06401 933 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 HLA-EP13747 358 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DARSP14868 501 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 NPR1P16066 1061 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF3P17036 446 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LBPP18428 481 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GGT1P19440 569 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SOX18P35713 384 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RPL35P42766 123 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RGS6P49758 472 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 AKR1D1P51857 326 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OR4D2P58180 307 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS26P62854 115 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ERVK-8P63133 956 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CSTF3Q12996 717 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GRM7Q14831 915 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MAD2L1BPQ15013 274 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LARS2Q15031 903 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PCBP1Q15365 356 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 STXBP2Q15833 593 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM83EQ2M2I3 478 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FUT11Q495W5 492 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GLYR1Q49A26 553 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PTPN20Q4JDL3 420 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZMAT1Q5H9K5 638 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PRSS36Q5K4E3 855 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 JADE1Q6IE81 842 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DENND1BQ6P3S1 775 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SPESP1Q6UW49 350 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KDELC1Q6UW63 502 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DPP8Q6V1X1 898 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CYHR1Q6ZMK1 362 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CCDC149Q6ZUS6 474 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 USP45Q70EL2 814 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TRILQ7L0X0 811 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LUZP2Q86TE4 346 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LRRTM3Q86VH5 581 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZSWIM9Q86XI8 627 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC22A9Q8IVM8 553 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SULF2Q8IWU5 870 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZZZ3Q8IYH5 903 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CENPLQ8N0S6 344 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 COLGALT1Q8NBJ5 622 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OR52E4Q8NGH9 312 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OR52N1Q8NH53 320 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 HTR3CQ8WXA8 447 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TFAP2BQ92481 460 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KIAA1143Q96AT1 154 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF669Q96BR6 464 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TBC1D20Q96BZ9 403 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SIPA1Q96FS4 1042 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ARL5BQ96KC2 179 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 QRFPRQ96P65 431 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OMDQ99983 421 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DPYSL5Q9BPU6 564 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF670Q9BS34 389 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 BBS2Q9BXC9 721 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 REG4Q9BYZ8 158 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 OR51E2Q9H255 320 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CLEC4MQ9H2X3 399 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FBRSL1Q9HCM7 1045 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 EMC7Q9NPA0 242 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PLCXD1Q9NUJ7 323 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ABCB8Q9NUT2 735 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LYARQ9NX58 379 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SMPD4Q9NXE4 827 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 TFCP2L1Q9NZI6 479 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PHF11Q9UIL8 331 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZMYM5Q9UJ78 669 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PCOLCE2Q9UKZ9 415 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 NDRG4Q9ULP0 352 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 RNF112Q9ULX5 631 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 MGAT4AQ9UM21 535 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ZFR2Q9UPR6 939 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNK7Q9Y2U2 307 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FIS1Q9Y3D6 152 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PTPRJQ12913 1337 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 LOXHD1Q8IVV2 1947 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SHANK3Q9BYB0 1731 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 TRAV20A0A0B4J274 112 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A1W2PPL8 197 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A1W2PQH9 124 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC12A8A0AV02 714 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 MFSD2BA6NFX1 497 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SMLR1H3BR10 107 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FABP7O15540 132 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SIGLEC6O43699 453 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 IPO13O94829 963 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms