RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF480Q8WV37 535 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ATL1Q8WXF7 558 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ASB11Q8WXH4 323 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 TM9SF4Q92544 642 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FKBP10Q96AY3 582 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 SLC30A3Q99726 388 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 MENTQ9BUN1 341 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 RAB17Q9H0T7 212 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 PARVBQ9HBI1 364 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ARL15Q9NXU5 204 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 GPR83Q9NYM4 423 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 SETXQ7Z333 2677 aaKnown RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 RP1L1Q8IWN7 2480 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 SUV39H1O43463 412 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 HCRTR1O43613 425 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 DPM1O60762 260 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CTSVO60911 334 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 WISP1O95388 367 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 AHSGP02765 367 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 ALBP02768 609 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CASRP41180 1078 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 AVPR1BP47901 424 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 GABRA4P48169 554 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CSRP3P50461 194 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 TBPL1P62380 186 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CAV1Q03135 178 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PRDX1Q06830 199 aaKnown RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 C2orf54Q08AI8 447 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 RAPSNQ13702 412 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 TEDDM1Q5T9Z0 273 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 HECTD2Q5U5R9 776 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CAPN13Q6MZZ7 669 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PAQR3Q6TCH7 311 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 SYT10Q6XYQ8 523 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 C17orf64Q86WR6 236 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CNTN4Q8IWV2 1026 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 AGGF1Q8N302 714 aaeCLIP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 SPATA4Q8NEY3 305 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 EEF1AKMT1Q8WVE0 214 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 MIEF2Q96C03 454 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 TSPAN17Q96FV3 270 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 CLMPQ9H6B4 373 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 WDR54Q9H977 334 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF304Q9HCX3 659 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 SAYSD1Q9NPB0 183 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 WHRNQ9P202 907 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF282Q9UDV7 671 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-232ENST00000489053 VWA7Q9Y334 891 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PCDHGB7Q9Y5F8 929 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 MAU2Q9Y6X3 613 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 FLNCQ14315 2725 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 PIKFYVEQ9Y2I7 2098 aa8.73□□□□□ -1.01
HDAC6-232ENST00000489053 UBR5O95071 2799 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 OR2A25A4D2G3 310 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 TTLL8A6PVC2 850 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 E7ENX8 843 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 H0YGG7 62 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 H7BY64 318 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 PYCARD-AS1I3L0S3 204 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 GFYI3L273 518 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 IPO13O94829 963 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 CTSBP07858 339 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ENO2P09104 434 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 NR1D1P20393 614 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 CXCR2P25025 360 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ITGA3P26006 1051 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 RPL21P46778 160 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 OR1D4P47884 311 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 CDKN2DP55273 166 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 AP1S2P56377 157 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ARF3P61204 181 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 RPS15AP62244 130 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SKP1P63208 163 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 MRPS25P82663 173 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 TAP2Q03519 686 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 NAE1Q13564 534 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 RBM20Q5T481 1227 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 MFSD4BQ5TF39 518 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 FRMPD2BQ6IN97 320 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 AGTRAPQ6RW13 159 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SHISA6Q6ZSJ9 500 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 RNF44Q7L0R7 432 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 OVCH1Q7RTY7 1134 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 GALNT7Q86SF2 657 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SLC26A11Q86WA9 606 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 HPS6Q86YV9 775 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 IGDCC3Q8IVU1 814 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 CTAGE3PQ8IX95 158 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 PRSS58Q8IYP2 241 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 NKAPQ8N5F7 415 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 MMABQ96EY8 250 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 PWWP2AQ96N64 755 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 PRAP1Q96NZ9 151 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 EGFL8Q99944 293 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms