RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TAS2R39P59534 338 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 RPS18P62269 152 aaKnown RBP13.68□□□□□ -0.22
BRCA1-218ENST00000489037 NCF4Q15080 339 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 TRADDQ15628 312 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 UGT8Q16880 541 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 NKAIN1Q4KMZ8 207 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 WASHC2DQ5SRD0 308 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 ATP1A1-AS1Q5TC04 95 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 CAPN13Q6MZZ7 669 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-218ENST00000489037 AGTRAPQ6RW13 159 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 ZDHHC24Q6UX98 284 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 RNF44Q7L0R7 432 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 SPNS2Q8IVW8 549 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 GBP5Q96PP8 586 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 RUFY1Q96T51 708 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 GPAMQ9HCL2 828 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 SLC6A20Q9NP91 592 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 CUTCQ9NTM9 273 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 TCFL5Q9UL49 500 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 A0A1B0GX78 115 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 HYKKA2RU49 373 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 FAM159BA6NKW6 160 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 TXNDC9O14530 226 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 DSCR3O14972 297 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 TSPAN12O95859 305 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 PRB1P04280 392 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 CTSBP07858 339 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF37AP17032 561 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 PHBP35232 272 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 GRK3P35626 688 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 GPX6P59796 221 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 TBPL1P62380 186 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 NAB1Q13506 487 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 NAE1Q13564 534 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 USP10Q14694 798 aaKnown RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 GRTP1Q5TC63 336 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 LCN10Q6JVE6 187 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 FBXO42Q6P3S6 717 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 FRA10AC1Q70Z53 315 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 C17orf64Q86WR6 236 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 RAB43Q86YS6 212 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 PPM1NQ8N819 430 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 EXD3Q8N9H8 876 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 IFT81Q8WYA0 676 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF285Q96NJ3 590 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 RBBP8Q99708 897 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 HAUS8Q9BT25 410 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 ATG10Q9H0Y0 220 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 LRRC4CQ9HCJ2 640 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 SMYD2Q9NRG4 433 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 STARD5Q9NSY2 213 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 TMEM184CQ9NVA4 438 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 GEMIN8Q9NWZ8 242 aaKnown RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 CTNNAL1Q9UBT7 734 aa13.67□□□□□ -0.22
BRCA1-218ENST00000489037 NOVA2Q9UNW9 492 aaKnown RBP13.67□□□□□ -0.22
BRCA1-218ENST00000489037 FITM1A5D6W6 292 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 CXorf49A8MYA2 514 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 H0YGG7 62 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 H7BY64 318 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 GUCA1CO95843 209 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 STMN1P16949 149 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 FOLR3P41439 243 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 PGGT1BP53609 377 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 ARF3P61204 181 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 YBX1P67809 324 aaKnown RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 RELAQ04206 551 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 KCNAB2Q13303 367 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 PHKG1Q16816 387 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 MUM1Q2TAK8 710 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 KBTBD12Q3ZCT8 623 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF425Q6IV72 752 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 MBOAT1Q6ZNC8 495 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 CABS1Q96KC9 395 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 PRAP1Q96NZ9 151 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 EGFL8Q99944 293 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 CDC14AQ9UNH5 594 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 MTO1Q9Y2Z2 717 aaKnown RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 PTRH2Q9Y3E5 179 aaKnown RBP13.66□□□□□ -0.22
BRCA1-218ENST00000489037 KCNMB2Q9Y691 235 aa13.66□□□□□ -0.22
BRCA1-218ENST00000489037 MED13Q9UHV7 2174 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 LOC400499M0QZD8 3231 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 LOC105369274A0A096LPK9 316 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 LOC102723532A0A0G2JNH3 316 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 MKRN2OSH3BPM6 223 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 PRPF4O43172 522 aaKnown RBP eCLIP13.65□□□□□ -0.225e-17■■■■■ 29.7
BRCA1-218ENST00000489037 PIAS1O75925 651 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 CAPN1P07384 714 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ANXA5P08758 320 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms