RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CRTC2Q53ET0 693 aaPredicted RBP12.36□□□□□ -0.43
PHF1-210ENST00000488767 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 CEP97Q8IW35 865 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 TCAIMQ8N3R3 496 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 FBXL8Q96CD0 374 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 SPRTNQ9H040 489 aaPredicted RBP12.36□□□□□ -0.43
PHF1-210ENST00000488767 ACSS3Q9H6R3 686 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 CNOT10Q9H9A5 744 aaKnown RBP12.36□□□□□ -0.43
PHF1-210ENST00000488767 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 PCMTD2Q9NV79 361 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 IFT80Q9P2H3 777 aaPredicted RBP12.36□□□□□ -0.43
PHF1-210ENST00000488767 NDOR1Q9UHB4 597 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 NFU1Q9UMS0 254 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
PHF1-210ENST00000488767 OARD1Q9Y530 152 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 PCDHGA6Q9Y5G7 932 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
PHF1-210ENST00000488767 CFAP47Q6ZTR5 3102 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 A0A1B0GX78 115 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 CDC7O00311 574 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 PHGDHO43175 533 aaKnown RBP12.35□□□□□ -0.43
PHF1-210ENST00000488767 RAB40ALP0C0E4 278 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TNFRSF8P28908 595 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 RORAP35398 523 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 SLC26A3P40879 764 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 GABRA4P48169 554 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 SERPINB9P50453 376 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 PGGT1BP53609 377 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 CDKL1Q00532 357 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 RELAQ04206 551 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 CDC20Q12834 499 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TSNQ15631 228 aaKnown RBP12.35□□□□□ -0.43
PHF1-210ENST00000488767 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 WASHC2DQ5SRD0 308 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TEX35Q5T0J7 233 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 MROH9Q5TGP6 573 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 PRAMEF17Q5VTA0 474 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 C1orf189Q5VU69 101 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
PHF1-210ENST00000488767 SBSNQ6UWP8 590 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TMEM207Q6UWW9 146 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 MBOAT1Q6ZNC8 495 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TTLL10Q6ZVT0 673 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TRMT10CQ7L0Y3 403 aaKnown RBP12.35□□□□□ -0.43
PHF1-210ENST00000488767 SYVN1Q86TM6 617 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 PAQR7Q86WK9 346 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 LSM14AQ8ND56 463 aaKnown RBP12.35□□□□□ -0.43
PHF1-210ENST00000488767 CHST8Q9H2A9 424 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 ACTL8Q9H568 366 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 SLC6A20Q9NP91 592 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 ENAMQ9NRM1 1142 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 CUTCQ9NTM9 273 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 TMEM184CQ9NVA4 438 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 IL17BQ9UHF5 180 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 DYRK1BQ9Y463 629 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 ZFYVE26Q68DK2 2539 aa12.35□□□□□ -0.43
PHF1-210ENST00000488767 NBEAQ8NFP9 2946 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 A0A087X1B8 175 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CCDC189A1A4V9 331 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 H7BY64 318 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 PRPF4O43172 522 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■■■■■ 27.2
PHF1-210ENST00000488767 CTSVO60911 334 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CREG1O75629 220 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 FAM155BO75949 473 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 KRT38O76015 456 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 RECKO95980 971 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 SFTPCP11686 197 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CNTFP26441 200 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 MSH2P43246 934 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 SERPINB8P50452 374 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 RPS15AP62244 130 aaKnown RBP12.34□□□□□ -0.43
PHF1-210ENST00000488767 CSHL1Q14406 222 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.431e-11■■■■■ 28.4
PHF1-210ENST00000488767 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
PHF1-210ENST00000488767 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 MUM1Q2TAK8 710 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 KLC3Q6P597 504 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 LCTLQ6UWM7 567 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CSNK1A1LQ8N752 337 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 SLC38A9Q8NBW4 561 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 ANKRD49Q8WVL7 239 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 THAP11Q96EK4 314 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 WBP1Q96G27 269 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 TSNARE1Q96NA8 513 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 PRAP1Q96NZ9 151 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CCDC77Q9BR77 488 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 SGPP1Q9BX95 441 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 DHCR7Q9UBM7 475 aaKnown RBP12.34□□□□□ -0.43
PHF1-210ENST00000488767 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 CDC14AQ9UNH5 594 aa12.34□□□□□ -0.43
PHF1-210ENST00000488767 POLHQ9Y253 713 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms