RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CSTF2P33240 577 aaKnown RBP eCLIP2.54□□□□□ -22e-13■■■■■ 37.5
R3HDM1-219ENST00000488035 DUTP33316 252 aaKnown RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 CDKN1AP38936 164 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 GLIPR1P48060 266 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 NOVP48745 357 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 LBX1P52954 281 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 NAGLUP54802 743 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 BFSP1Q12934 665 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TNK1Q13470 666 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 RRS1Q15050 365 aaKnown RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 PHKG1Q16816 387 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 ZNF876PQ49A33 203 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 XKR6Q5GH73 641 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 LRRC73Q5JTD7 316 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 SLC35D3Q5M8T2 416 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 FAM72AQ5TYM5 149 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 SHEQ5VZ18 495 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 OR4A47Q6IF82 309 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 FAM72DQ6L9T8 149 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 CYB5D1Q6P9G0 228 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 MOXD1Q6UVY6 613 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 PET117Q6UWS5 81 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TMEM207Q6UWW9 146 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 C11orf57Q6ZUT1 292 aaPredicted RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 BTN2A1Q7KYR7 527 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 NRARPQ7Z6K4 114 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 FAM72BQ86X60 149 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 DCLK2Q8N568 766 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 LRTM2Q8N967 370 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TMEM178AQ8NBL3 297 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 FAM76AQ8TAV0 307 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 TMEM190Q8WZ59 177 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 PYCR2Q96C36 320 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 GIMAP5Q96F15 307 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 SPATA17Q96L03 361 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 JAKMIP1Q96N16 626 aaKnown RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 NDNQ99608 321 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 LITAFQ99732 161 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 MAP3K3Q99759 626 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 DESI2Q9BSY9 194 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 INPP5KQ9BT40 448 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 PI4K2AQ9BTU6 479 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 ZMYND12Q9H0C1 365 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 CPVLQ9H3G5 476 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TRPV4Q9HBA0 871 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 GSN-AS1Q9NRJ2 163 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 DDX43Q9NXZ2 648 aaKnown RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 FLRT3Q9NZU0 649 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.54□□□□□ -2
R3HDM1-219ENST00000488035 SNX7Q9UNH6 387 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 TCF19Q9Y242 345 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 R4GN57 208 aa2.54□□□□□ -2
R3HDM1-219ENST00000488035 SNED1Q8TER0 1413 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 A0A0G2JLW4 131 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 TRBV5-5A0A0J9YX44 114 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 A0A1W2PPW3 197 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 MSGN1A6NI15 193 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SNURFLB1AK76 121 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 PPIP5K2O43314 1243 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 PCDH7O60245 1069 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SNX3O60493 162 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 ZG16O60844 167 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 NME6O75414 186 aaPredicted RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 RPS6KA5O75582 802 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SIX3O95343 332 aaPredicted RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 CAVIN2O95810 425 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 APOHP02749 345 aaPredicted RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 EDN1P05305 212 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SUPT20HL2P0C7V6 817 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 STAG3L1P0CL83 205 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 ANOS1P23352 680 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 PSMA3P25788 255 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 MAGEA11P43364 429 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 NR0B1P51843 470 aaKnown RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 MFAP3P55082 362 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 POU5F1Q01860 360 aaKnown RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 KLC1Q07866 573 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 ILF2Q12905 390 aaKnown RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 TRAP1Q12931 704 aaKnown RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 TAF13Q15543 124 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 UGCGQ16739 394 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 C20orf194Q5TEA3 1177 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 TXNRD3NBQ6F5E7 133 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 OR4C11Q6IEV9 310 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 FAM166AQ6J272 317 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 ARHGAP11AQ6P4F7 1023 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 BHLHB9Q6PI77 547 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 PRSS55Q6UWB4 352 aaPredicted RBP2.53□□□□□ -2
R3HDM1-219ENST00000488035 Q6ZSR9 355 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SPATA21Q7Z572 469 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 PIGWQ7Z7B1 504 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 ANKRD23Q86SG2 305 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 LACC1Q8IV20 430 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 SIX6OS1Q8N1H7 587 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 UXS1Q8NBZ7 420 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 OR13C3Q8NGS6 347 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 P2RX5Q93086 422 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 FAM162AQ96A26 154 aa2.53□□□□□ -2
R3HDM1-219ENST00000488035 C4orf45Q96LM5 186 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms