RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GON4LQ3T8J9 2241 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PIPSLA2A3N6 862 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 FXYD1O00168 92 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ENTPD5O75356 428 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 EEDO75530 441 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PDE5AO76074 875 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 EML2O95834 649 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 BCKDHAP12694 445 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 AK4P27144 223 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RAB28P51157 221 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 KCNK10P57789 538 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TSTA3Q13630 321 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SLBPQ14493 270 aaKnown RBP eCLIP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PTGR1Q14914 329 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 KPNB1Q14974 876 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TRMT5Q32P41 509 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PIGGQ5H8A4 983 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MED27Q6P2C8 311 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 FAM129CQ86XR2 697 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 NRROSQ86YC3 692 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 FBXW8Q8N3Y1 598 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 LIX1Q8N485 282 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RNF175Q8N4F7 328 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 CCL4L1Q8NHW4 92 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 REPS1Q96D71 796 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 APIPQ96GX9 242 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 METTL2AQ96IZ6 378 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MTERF1Q99551 399 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RAB11FIP5Q9BXF6 653 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PCBD2Q9H0N5 130 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TMEM168Q9H0V1 697 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PCED1AQ9H1Q7 454 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 DLGAP4Q9Y2H0 992 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SLCO1B1Q9Y6L6 691 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 KNL1Q8NG31 2342 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 COL6A3P12111 3177 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 TDRD6O60522 2096 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 SPTY2D1-AS1A0A0U1RR47 76 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 MAGEB17A8MXT2 336 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ANGPT2O15123 496 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CIB2O75838 187 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 SORBS2O94875 1100 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ETHE1O95571 254 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CDH1P12830 882 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PCSK2P16519 638 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 AMD1P17707 334 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ACTR3P61158 418 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PSME3P61289 254 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 YBX1P67809 324 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 LAPTM5Q13571 262 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CEACAM7Q14002 265 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 TLR1Q15399 786 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PAGE2BQ5JRK9 111 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 THEMIS2Q5TEJ8 643 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CACHD1Q5VU97 1274 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 LPCAT2Q7L5N7 544 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 RD3Q7Z3Z2 195 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 HPS6Q86YV9 775 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 C2orf73Q8N5S3 287 aaPredicted RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PCYOX1LQ8NBM8 494 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ABHD11Q8NFV4 315 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 OR52E1Q8NGJ3 308 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 OR2L8Q8NGY9 312 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 HUS1BQ8NHY5 278 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 VPS33AQ96AX1 596 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CDRT15Q96T59 188 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 GPATCH1Q9BRR8 931 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 KIR3DX1Q9H7L2 352 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PELI2Q9HAT8 420 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 VPS29Q9UBQ0 182 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 TAC3Q9UHF0 121 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 BAIAP2L1Q9UHR4 511 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ICKQ9UPZ9 632 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 FOXE1O00358 373 aaPredicted RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PRPS2P11908 318 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 SDC1P18827 310 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 PSMB5P28074 263 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 MAPK1P28482 360 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 HNRNPH1P31943 449 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ACTR1BP42025 376 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ACTR1AP61163 376 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 MTAPQ13126 283 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 EIF2B5Q13144 721 aaKnown RBP9.1□□□□□ -0.95
SF3B1-211ENST00000487698 FZD2Q14332 565 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 SNCBQ16143 134 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 ZNF423Q2M1K9 1284 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 TIGD2Q4W5G0 525 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 C17orf64Q86WR6 236 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 HID1Q8IV36 788 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 RAB42Q8N4Z0 105 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 EFCAB3Q8N7B9 438 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
SF3B1-211ENST00000487698 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms