RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PAGE3Q5JUK9 113 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 CTSL3PQ5NE16 218 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PTCHD4Q6ZW05 846 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 AHSA2Q719I0 299 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 LRRTM4Q86VH4 590 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 GPR26Q8NDV2 337 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 VANGL1Q8TAA9 524 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TFGQ92734 400 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 MAELQ96JY0 434 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ARMC1Q9NVT9 282 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PCDHGB3Q9Y5G1 929 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 KRT8P05787 483 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 HNRNPA1P09651 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 BMP2P12643 396 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 FSHRP23945 695 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RPS13P62277 151 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RBM48Q5RL73 367 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 GALNT18Q6P9A2 607 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 BHLHA9Q7RTU4 235 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 KBTBD8Q8NFY9 601 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 STON2Q8WXE9 905 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SLC35A5Q9BS91 424 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RPF2Q9H7B2 306 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TTC34A8MYJ7 566 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RASAL1O95294 804 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 NADKO95544 446 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 C1QAP02745 245 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 JUPP14923 745 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PAICSP22234 425 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SGSHP51688 502 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 CLDN8P56748 225 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 KCTD21Q4G0X4 260 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 CCDC103Q8IW40 242 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 HDDC3Q8N4P3 179 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 OR10Q1Q8NGQ4 319 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 OR9A1PQ8NGU1 263 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF347Q96SE7 839 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PKMYT1Q99640 499 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 NUAK2Q9H093 628 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF334Q9HCZ1 680 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 IL23AQ9NPF7 189 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TUBA8Q9NY65 449 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PAIP2BQ9ULR5 123 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 GSAPA4D1B5 854 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PDPK1O15530 556 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 UGT2B17O75795 530 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 GSTM5P46439 218 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 KCNC1P48547 511 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PLA2G16P53816 162 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 CASP9P55211 416 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SLC7A9P82251 487 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 MYBPC3Q14896 1274 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TMIGD1Q6UXZ0 262 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 OXR1Q8N573 874 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 NACC2Q96BF6 587 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ZBED6CLQ96FA7 236 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 PDLIM5Q96HC4 596 aaKnown RBP11.47□□□□□ -0.57
TRA2B-214ENST00000487615 SLC22A12Q96S37 553 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF696Q9H7X3 374 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
TRA2B-214ENST00000487615 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 FADS2P1A8MWK0 482 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 B4GALT3O60512 393 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CYP7B1O75881 506 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 HPGDP15428 266 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CLCN2P51788 898 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CDKL4Q5MAI5 379 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 ERI1Q8IV48 349 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 RASSF5Q8WWW0 418 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 SLC5A11Q8WWX8 675 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 KLK6Q92876 244 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM125Q96AQ2 219 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 OR51B5Q9H339 312 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 COLEC10Q9Y6Z7 277 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 ARID2Q68CP9 1835 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 FBP2O00757 339 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 AP3D1O14617 1153 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 TRIM24O15164 1050 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 SLC31A1O15431 190 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 SNAP29O95721 258 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 KLK1P06870 262 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 ACP5P13686 325 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CSNK1DP48730 415 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CCR8P51685 355 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 WDR5P61964 334 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 OLR1P78380 273 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms