RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TSPEARQ8WU66 669 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 VMP1Q96GC9 406 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 TRIB3Q96RU7 358 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 CTRCQ99895 268 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 EMILIN2Q9BXX0 1053 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 DUSP21Q9H596 190 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 AGAP5A6NIR3 686 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 ARNTLO00327 626 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 SAP18O00422 153 aaKnown RBP12.03□□□□□ -0.48
HSPG2-211ENST00000486901 MANBAO00462 879 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 FPGTO14772 594 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 HPRP00739 348 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 EPB42P16452 691 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-211ENST00000486901 TAF1AQ15573 450 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-211ENST00000486901 TMEM132CQ8N3T6 1108 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 TEX26Q8N6G2 289 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-211ENST00000486901 GPR150Q8NGU9 434 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 UBASH3BQ8TF42 649 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 SH3KBP1Q96B97 665 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 PPP1R2P1Q96PQ5 205 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 CNPPD1Q9BV87 410 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 CDADC1Q9BWV3 514 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
HSPG2-211ENST00000486901 CCDC88CQ9P219 2028 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 ANKRD34BA5PLL1 514 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 EVPLLA8MZ36 301 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 KPNA5O15131 536 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 ELNP15502 786 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 CTSKP43235 329 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 CDH12P55289 794 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 GABARAPL2P60520 117 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 ACVR1Q04771 509 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.48
HSPG2-211ENST00000486901 TUSC3Q13454 348 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 IRF3Q14653 427 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 SETD9Q8NE22 299 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 OR5AK3PQ8NH89 298 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 MYLIPQ8WY64 445 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.48
HSPG2-211ENST00000486901 COPS8Q99627 209 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 SMAD5Q99717 465 aaKnown RBP12.02□□□□□ -0.48
HSPG2-211ENST00000486901 PTPN18Q99952 460 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 ITPAQ9BY32 194 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 SERHLQ9NQF3 203 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 NECTIN3Q9NQS3 549 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 KLHL3Q9UH77 587 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 ACSL6Q9UKU0 697 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.48
HSPG2-211ENST00000486901 CCRL2O00421 344 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 YY2O15391 372 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 OR2B6P58173 313 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 SYT6Q5T7P8 510 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 RSPO2Q6UXX9 243 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 TSPAN33Q86UF1 283 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 DTX3Q8N9I9 347 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 NELL1Q92832 810 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 LINC00597Q9H2U6 94 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 SH3BP4Q9P0V3 963 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 CRLS1Q9UJA2 301 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 SLC22A14Q9Y267 594 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 CCL27Q9Y4X3 112 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 OR2A25A4D2G3 310 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 IGFBP1P08833 259 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 TSTQ16762 297 aaKnown RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 KIAA1614Q5VZ46 1190 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 PSD2Q9BQI7 771 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 ABCB9Q9NP78 766 aa12.02□□□□□ -0.49
HSPG2-211ENST00000486901 PAQR5Q9NXK6 330 aaPredicted RBP12.02□□□□□ -0.49
HSPG2-211ENST00000486901 KMOO15229 486 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 NUAK1O60285 661 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 WDR47O94967 919 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SOX14O95416 240 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 ADRA2AP08913 450 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 IFI30P13284 250 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 COX7A2P14406 83 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SDC1P18827 310 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SOX3P41225 446 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 CD83Q01151 205 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 ST3GAL4Q11206 333 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 BCL2A1Q16548 175 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 IER5LQ5T953 404 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 GLCCI1Q86VQ1 547 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SLC5A8Q8N695 610 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 OR4K1Q8NGD4 311 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF675Q8TD23 568 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 C1orf74Q96LT6 269 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 NIPSNAP1Q9BPW8 284 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms