RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 BECN2A8MW95 431 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 NPIPA2E9PIF3 369 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CTDSP2O14595 271 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TNPO2O14787 897 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 MDM4O15151 490 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SMAD9O15198 467 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TGFB1I1O43294 461 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TULP3O75386 442 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CLPXO76031 633 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SEC14L2O76054 403 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CIAO1O76071 339 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 KAT7O95251 611 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PGLSO95336 258 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 LCA5LO95447 670 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 VNN2O95498 520 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TFRCP02786 760 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SERPING1P05155 500 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ABHD2P08910 425 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ACAA1P09110 424 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 FAM90A13PP0C7W8 464 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 FAM90A24PP0C7X0 464 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SELLP14151 372 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PRF1P14222 555 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 EPORP19235 508 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 EN2P19622 333 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TCN1P20061 433 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 NT5EP21589 574 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 KCNA3P22001 575 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 POU1F1P28069 291 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ADORA2AP29274 412 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 EPHA3P29320 983 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 HMOX2P30519 316 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 FEN1P39748 380 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 GPD2P43304 727 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 JAK3P52333 1124 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CRYBB1P53674 252 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CDH8P55286 799 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PRPS1P60891 318 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ST8SIA6P61647 398 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 HNRNPKP61978 463 aaKnown RBP eCLIP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RPS13P62277 151 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RPL23AP62750 156 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 GCNT1Q02742 428 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PLOD1Q02809 727 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RASGEF1BQ0VAM2 473 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RAB32Q13637 225 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 NPY5RQ15761 445 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CYP1B1Q16678 543 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 AP5B1Q2VPB7 878 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SLC36A3Q495N2 470 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CDONQ4KMG0 1287 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RNASE12Q5GAN4 147 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PAGE2BQ5JRK9 111 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 GCNT6Q5T4J0 391 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 C1orf94Q6P1W5 598 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TMEM71Q6P5X7 295 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TMEM65Q6PI78 240 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 IL20RBQ6UXL0 311 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 C15orf39Q6ZRI6 1047 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RBPMS2Q6ZRY4 209 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CHST9Q7L1S5 443 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 IQCHQ86VS3 1027 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CCDC25Q86WR0 208 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TICAM1Q8IUC6 712 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 MISPQ8IVT2 679 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PM20D2Q8IYS1 436 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SLC15A4Q8N697 577 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ASCC1Q8N9N2 400 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 KDM1BQ8NB78 822 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ZNF397Q8NF99 534 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 OR7G3Q8NG95 312 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 OR2T34Q8NGX1 318 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 KBTBD7Q8WVZ9 684 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CELF1Q92879 486 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RFT1Q96AA3 541 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 GRAMD1AQ96CP6 724 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 HAVCR1Q96D42 359 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 OTUB2Q96DC9 234 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SAT2Q96F10 170 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ZDHHC12Q96GR4 267 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 REXO5Q96IC2 774 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CEP170P1Q96L14 293 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 DGAT2Q96PD7 388 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 PRR25Q96S07 402 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 INTS14Q96SY0 518 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CHP1Q99653 195 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 RBM4Q9BWF3 364 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ZNF416Q9BWM5 594 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CACNG6Q9BXT2 260 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TDRD1Q9BXT4 1180 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 DERL2Q9GZP9 239 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 ZNF350Q9GZX5 532 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 DNTTIP1Q9H147 329 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 SLC25A18Q9H1K4 315 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 CDT1Q9H211 546 aa4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 FOXP1Q9H334 677 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 GPN1Q9HCN4 374 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-217ENST00000486532 TRIM36Q9NQ86 728 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms