RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ISL2Q96A47 359 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 CHRNA10Q9GZZ6 450 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 SLC6A20Q9NP91 592 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 FGF21Q9NSA1 209 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 SOHLH2Q9NX45 425 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 ZNF180Q9UJW8 692 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 NOVA2Q9UNW9 492 aaKnown RBP12.41□□□□□ -0.42
SSR4-211ENST00000486204 KLHL20Q9Y2M5 609 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 KLK4Q9Y5K2 254 aa12.41□□□□□ -0.42
SSR4-211ENST00000486204 EXOC1LA0A1B0GW35 172 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 POC1B-GALNT4F8VUJ3 575 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 H3BMH7 237 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 NRP2O60462 931 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 FKBP9O95302 570 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 DLGAP3O95886 979 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 INHBAP08476 426 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 CCDC166P0CW27 439 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ZNF28P17035 718 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 CD82P27701 267 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 GRIA3P42263 894 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 AP1S2P56377 157 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 TBPL1P62380 186 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ACY1Q03154 408 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 TSNQ15631 228 aaKnown RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 ERCC6LQ2NKX8 1250 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ZNF787Q6DD87 383 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 FCRL6Q6DN72 434 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 SYTL1Q8IYJ3 562 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 CENPLQ8N0S6 344 aaPredicted RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 SPATA6LQ8N4H0 392 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 PTERQ96BW5 349 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 CCDC138Q96M89 665 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 TEFMQ96QE5 360 aaKnown RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 MIPEPQ99797 713 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 ASPSCR1Q9BZE9 553 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 UNKQ9C0B0 810 aaKnown RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 PDE7BQ9NP56 450 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 SNX15Q9NRS6 342 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 TMEM184BQ9Y519 407 aaPredicted RBP12.4□□□□□ -0.42
SSR4-211ENST00000486204 SCN3AQ9NY46 2000 aa12.4□□□□□ -0.42
SSR4-211ENST00000486204 SPENQ96T58 3664 aaKnown RBP12.39□□□□□ -0.43
SSR4-211ENST00000486204 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 IGKV1-8A0A0C4DH67 115 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 C2P06681 752 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ARL4DP49703 201 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 SERPINB8P50452 374 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 SERPINB9P50453 376 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 CDKL1Q00532 357 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 IRF9Q00978 393 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 CSHL1Q14406 222 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 OR4D1Q15615 310 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 SF1Q15637 639 aaKnown RBP12.39□□□□□ -0.43
SSR4-211ENST00000486204 DEFB110Q30KQ9 67 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSR4-211ENST00000486204 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ICE2Q659A1 982 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 PWWP2BQ6NUJ5 590 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ADAMTSL2Q86TH1 951 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 DNAJC22Q8N4W6 341 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 AENQ8WTP8 325 aaKnown RBP12.39□□□□□ -0.43
SSR4-211ENST00000486204 FBXL8Q96CD0 374 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 TCTN2Q96GX1 697 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ZPBPQ9BS86 351 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ACAT2Q9BWD1 397 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 SGPP1Q9BX95 441 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
SSR4-211ENST00000486204 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 FETUBQ9UGM5 382 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 TAC3Q9UHF0 121 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 PILRAQ9UKJ1 303 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 RARRES3Q9UL19 164 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 SH2B3Q9UQQ2 575 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
SSR4-211ENST00000486204 A1L4Q6 167 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 OR2A25A4D2G3 310 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 TARM1B6A8C7 271 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 CTSVO60911 334 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 STK17BO94768 372 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 CTSBP07858 339 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 HIST1H2AGP0C0S8 130 aaPredicted RBP12.38□□□□□ -0.43
SSR4-211ENST00000486204 HIST1H2ADP20671 130 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 CNTFP26441 200 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 CRABP2P29373 138 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
SSR4-211ENST00000486204 SLC26A3P40879 764 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 MSH2P43246 934 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 MLLT10P55197 1068 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
SSR4-211ENST00000486204 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
SSR4-211ENST00000486204 KLRB1Q12918 225 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms