RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 PRSS56P0CW18 603 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 DARSP14868 501 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 CTNNA1P35221 906 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 KRT2P35908 639 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 TNNT3P45378 269 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 PTENP60484 403 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 TUBB4BP68371 445 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 KRT83P78385 493 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 GCNT1Q02742 428 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 TRAP1Q12931 704 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 SQLEQ14534 574 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 GTDC1Q4AE62 458 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 ZRANB3Q5FWF4 1079 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 C9orf50Q5SZB4 431 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 NOTUMQ6P988 496 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 TMEM182Q6ZP80 229 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 PHLDB2Q86SQ0 1253 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 KLHL7Q8IXQ5 586 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 C4orf19Q8IY42 314 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 HPSE2Q8WWQ2 592 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 SEPT1Q8WYJ6 367 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 DNASE2BQ8WZ79 361 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 DNASE1L2Q92874 299 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 ST6GALNAC6Q969X2 333 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 PGLYRP2Q96PD5 576 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 MAP3K3Q99759 626 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 SHARPINQ9H0F6 387 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 ACTL8Q9H568 366 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 LMAN1LQ9HAT1 526 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 PPANQ9NQ55 473 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 DDX43Q9NXZ2 648 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 PKD2L2Q9NZM6 624 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 CHKBQ9Y259 395 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 KCNK7Q9Y2U2 307 aa3.96□□□□□ -1.78
FNDC3B-210ENST00000483344 GRIN2AQ12879 1464 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 ERVV-2B6SEH9 535 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 KLF11O14901 512 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 EPHB6O15197 1021 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 PPIP5K2O43314 1243 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 STX6O43752 255 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 FCGR3BO75015 233 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 GLRA3O75311 464 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 NADKO95544 446 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 EML2O95834 649 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 C9P02748 559 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 SP1P08047 785 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 CD48P09326 243 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 GP1BBP13224 206 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MUTP22033 750 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 CHRNB4P30926 498 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 SOAT1P35610 550 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MAGEA11P43364 429 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 CACNG1Q06432 222 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 RBBP7Q16576 425 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 NHSL2Q5HYW2 709 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 TXNRD3NBQ6F5E7 133 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 G2E3Q7L622 706 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 KIRREL3Q8IZU9 778 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MARVELD2Q8N4S9 558 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 TRIM58Q8NG06 486 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 OR4C3Q8NH37 302 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 SLC26A7Q8TE54 656 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 SUSD6Q92537 303 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 P2RX5Q93086 422 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 PYCR2Q96C36 320 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MLPHQ9BV36 600 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 PITPNM3Q9BZ71 974 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 FAM49AQ9H0Q0 323 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MINDY3Q9H8M7 445 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 C19orf25Q9UFG5 118 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 MAN1B1Q9UKM7 699 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 ITGA11Q9UKX5 1188 aa3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 ZFP37Q9Y6Q3 630 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 GREB1LQ9C091 1923 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-210ENST00000483344 PRR23D1E9PI22 279 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 PRAF2O60831 178 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 TRMUO75648 421 aaKnown RBP3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 TGDSO95455 350 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 RLN1P04808 185 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 SERPING1P05155 500 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 GPIP06744 558 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 SUPT20HL2P0C7V6 817 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 STAG3L1P0CL83 205 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 PRR23D2P0DMB1 279 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 LBPP18428 481 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 LHCGRP22888 699 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 ALDH4A1P30038 563 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 TIA1P31483 386 aaKnown RBP eCLIP3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 MAP2K2P36507 400 aa3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 NKX2-1P43699 371 aaPredicted RBP3.94□□□□□ -1.78
FNDC3B-210ENST00000483344 CDX1P47902 265 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms