RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TRIM55Q9BYV6 548 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 PCBD2Q9H0N5 130 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ING2Q9H160 280 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ABCF3Q9NUQ8 709 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 GRHL1Q9NZI5 618 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 STOX2Q9P2F5 926 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 TLK1Q9UKI8 766 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 PDE10AQ9Y233 779 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 PSAT1Q9Y617 370 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 J3QKU1 62 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 TSPAN12O95859 305 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ONECUT2O95948 504 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ALBP02768 609 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 EIF2S1P05198 315 aaKnown RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ITGAXP20702 1163 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 CCND1P24385 295 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 HRH2P25021 359 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 OTX2P32243 289 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 EMP3P54852 163 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 RRADP55042 308 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 TBPL1P62380 186 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 CAV1Q03135 178 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 SSPNQ14714 243 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PRAMEF13Q5VWM6 474 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 CPZQ66K79 652 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PRMT9Q6P2P2 845 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 FBXO42Q6P3S6 717 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 MED25Q71SY5 747 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ADCK2Q7Z695 626 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 MRGPREQ86SM8 312 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ZC3HC1Q86WB0 502 aaKnown RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PAQR7Q86WK9 346 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PTRH1Q86Y79 214 aaKnown RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 TMEM102Q8N9M5 508 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 RERGQ96A58 199 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PTERQ96BW5 349 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 C16orf45Q96MC5 204 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 PHACTR1Q9C0D0 580 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 WDR54Q9H977 334 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 SAYSD1Q9NPB0 183 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 SLC22A11Q9NSA0 550 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ANAPC2Q9UJX6 822 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 TP53TG5Q9Y2B4 290 aa11.36□□□□□ -0.59
HMGN1-213ENST00000482192 SMG1Q96Q15 3661 aaKnown RBP11.36□□□□□ -0.59
HMGN1-213ENST00000482192 ATMQ13315 3056 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 FAM95CA0A1B0GW59 222 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 H0YGG7 62 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PEX12O00623 359 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 TXNDC9O14530 226 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CNOT3O75175 753 aaKnown RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 IGHEP01854 428 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ENO2P09104 434 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF37AP17032 561 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 SAT1P21673 171 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PGDP52209 483 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 AP1S2P56377 157 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ARF3P61204 181 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CHAF1BQ13112 559 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ATP1A4Q13733 1029 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PHKG1Q16816 387 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 MUM1Q2TAK8 710 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PRTGQ2VWP7 1150 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 AGTRAPQ6RW13 159 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CAPN12Q6ZSI9 719 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ASB18Q6ZVZ8 466 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 METTL27Q8N6F8 245 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CDKL2Q92772 493 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 NACC2Q96BF6 587 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PDLIM5Q96HC4 596 aaKnown RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CABS1Q96KC9 395 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 OR2A5Q96R48 311 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 TRIM54Q9BYV2 358 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 SLC26A1Q9H2B4 701 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 RHOJQ9H4E5 214 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ARL15Q9NXU5 204 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 TXNDC16Q9P2K2 825 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 CDC23Q9UJX2 597 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 G3BP2Q9UN86 482 aaKnown RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 PCDHGA9Q9Y5G4 932 aaKnown RBP11.35□□□□□ -0.59
HMGN1-213ENST00000482192 ATRXP46100 2492 aa11.35□□□□□ -0.59
HMGN1-213ENST00000482192 TCRBV9S1A1TA0A576 114 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 H7BY64 318 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CEACAM4O75871 244 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 UMODP07911 640 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 GSTA2P09210 222 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 SSTR1P30872 391 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 OR1D4P47884 311 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CCL11P51671 97 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 PGGT1BP53609 377 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 PLTPP55058 493 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 KLRB1Q12918 225 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 NKG7Q16617 165 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CAPN13Q6MZZ7 669 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-213ENST00000482192 MBOAT1Q6ZNC8 495 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CYS1Q717R9 158 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 COX15Q7KZN9 410 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms