RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 H0Y858 1186 aa14□□□□□ -0.17
CHD3-211ENST00000481999 H3BM21 787 aa14□□□□□ -0.17
CHD3-211ENST00000481999 PSIP1O75475 530 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 LDLRP01130 860 aa14□□□□□ -0.17
CHD3-211ENST00000481999 VARSP26640 1264 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 CDH15P55291 814 aa14□□□□□ -0.17
CHD3-211ENST00000481999 ELP6Q0PNE2 266 aa14□□□□□ -0.17
CHD3-211ENST00000481999 FAM174BQ3ZCQ3 159 aa14□□□□□ -0.17
CHD3-211ENST00000481999 SPANXN4Q5MJ08 99 aa14□□□□□ -0.17
CHD3-211ENST00000481999 AGBL4Q5VU57 503 aa14□□□□□ -0.17
CHD3-211ENST00000481999 AGTRAPQ6RW13 159 aa14□□□□□ -0.17
CHD3-211ENST00000481999 HEATR4Q86WZ0 1026 aa14□□□□□ -0.17
CHD3-211ENST00000481999 USP7Q93009 1102 aa14□□□□□ -0.17
CHD3-211ENST00000481999 TSSK3Q96PN8 268 aa14□□□□□ -0.17
CHD3-211ENST00000481999 S1PR5Q9H228 398 aa14□□□□□ -0.17
CHD3-211ENST00000481999 OCEL1Q9H607 264 aa14□□□□□ -0.17
CHD3-211ENST00000481999 LRTM1Q9HBL6 345 aa14□□□□□ -0.17
CHD3-211ENST00000481999 SLC6A13Q9NSD5 602 aa14□□□□□ -0.17
CHD3-211ENST00000481999 SMPD3Q9NY59 655 aaPredicted RBP14□□□□□ -0.17
CHD3-211ENST00000481999 NFKBIL1Q9UBC1 381 aaPredicted RBP14□□□□□ -0.17
CHD3-211ENST00000481999 WDFY4Q6ZS81 3184 aa14□□□□□ -0.17
CHD3-211ENST00000481999 KLHL33A6NCF5 533 aa14□□□□□ -0.17
CHD3-211ENST00000481999 TRIM64A6NGJ6 449 aa14□□□□□ -0.17
CHD3-211ENST00000481999 K7EQS6 105 aa14□□□□□ -0.17
CHD3-211ENST00000481999 EI24O14681 340 aa14□□□□□ -0.17
CHD3-211ENST00000481999 CLOCKO15516 846 aa14□□□□□ -0.17
CHD3-211ENST00000481999 AP2A2O94973 939 aa14□□□□□ -0.17
CHD3-211ENST00000481999 PAK4O96013 591 aaPredicted RBP14□□□□□ -0.17
CHD3-211ENST00000481999 MPC1LP0DKB6 136 aa14□□□□□ -0.17
CHD3-211ENST00000481999 NFKBIAP25963 317 aa14□□□□□ -0.17
CHD3-211ENST00000481999 RPL10P27635 214 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 MAP4P27816 1152 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 FGL2Q14314 439 aa14□□□□□ -0.17
CHD3-211ENST00000481999 KIAA0040Q15053 153 aa14□□□□□ -0.17
CHD3-211ENST00000481999 GTDC1Q4AE62 458 aa14□□□□□ -0.17
CHD3-211ENST00000481999 ZNF658BQ4V348 819 aaPredicted RBP14□□□□□ -0.17
CHD3-211ENST00000481999 LRRC23Q53EV4 343 aaPredicted RBP14□□□□□ -0.17
CHD3-211ENST00000481999 TMEM31Q5JXX7 168 aa14□□□□□ -0.17
CHD3-211ENST00000481999 GPR141Q7Z602 305 aa14□□□□□ -0.17
CHD3-211ENST00000481999 NLRP8Q86W28 1048 aa14□□□□□ -0.17
CHD3-211ENST00000481999 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
CHD3-211ENST00000481999 ADAMTS16Q8TE57 1224 aa14□□□□□ -0.17
CHD3-211ENST00000481999 CXorf40AQ8TE69 158 aa14□□□□□ -0.17
CHD3-211ENST00000481999 CYGBQ8WWM9 190 aa14□□□□□ -0.17
CHD3-211ENST00000481999 TIFAQ96CG3 184 aa14□□□□□ -0.17
CHD3-211ENST00000481999 PPP1R16AQ96I34 528 aa14□□□□□ -0.17
CHD3-211ENST00000481999 IL17FQ96PD4 163 aa14□□□□□ -0.17
CHD3-211ENST00000481999 TRMT61BQ9BVS5 477 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 ELOVL6Q9H5J4 265 aa14□□□□□ -0.17
CHD3-211ENST00000481999 RPF2Q9H7B2 306 aaKnown RBP14□□□□□ -0.17
CHD3-211ENST00000481999 KLHL42Q9P2K6 505 aa14□□□□□ -0.17
CHD3-211ENST00000481999 TRPS1Q9UHF7 1281 aa14□□□□□ -0.17
CHD3-211ENST00000481999 MAGEL2Q9UJ55 1249 aa14□□□□□ -0.17
CHD3-211ENST00000481999 NEUROG3Q9Y4Z2 214 aa14□□□□□ -0.17
CHD3-211ENST00000481999 WDR87Q6ZQQ6 2873 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 FRYLO94915 3013 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 PABPN1LA6NDY0 278 aaKnown RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 IFRD1O00458 451 aaPredicted RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 POP7O75817 140 aaKnown RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 RPS9P46781 194 aaKnown RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 MEF2AQ02078 507 aaPredicted RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 CST6Q15828 149 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 XKR6Q5GH73 641 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 LRRC70Q7Z2Q7 622 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 CYP2U1Q7Z449 544 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 TRIM46Q7Z4K8 759 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 C11orf96Q7Z7L8 435 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 THOC6Q86W42 341 aaKnown RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 ANKRD46Q86W74 232 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 DHRSXQ8N5I4 330 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 HCAR2Q8TDS4 363 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 BIRC7Q96CA5 298 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 FZD3Q9NPG1 666 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 DNAJC11Q9NVH1 559 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 OBP2AQ9NY56 170 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 PCDHB3Q9Y5E6 796 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 PSMD11O00231 422 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 RGS14O43566 566 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 ETHE1O95571 254 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 MT-ND1P03886 318 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 CDK4P11802 303 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 HRH2P25021 359 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 MAT2AP31153 395 aaKnown RBP13.99□□□□□ -0.17
CHD3-211ENST00000481999 LTBRP36941 435 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 CAPGP40121 348 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 GNPDA1P46926 289 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 STARD3Q14849 445 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 WSCD2Q2TBF2 565 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 ITPRIPL2Q3MIP1 535 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 ZBED5Q49AG3 693 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 ABRAXAS1Q6UWZ7 409 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 HDDC3Q8N4P3 179 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 APOLD1Q96LR9 279 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 BDH2Q9BUT1 245 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 LMAN2LQ9H0V9 348 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 IKZF5Q9H5V7 419 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 PRM3Q9NNZ6 103 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 ZNF639Q9UID6 485 aa13.99□□□□□ -0.17
CHD3-211ENST00000481999 C1QTNF3-AMACRE9PGA6 284 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms