RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ANXA5P08758 320 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 ERGP11308 486 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 EZRP15311 586 aaKnown RBP14.66□□□□□ -0.06
CDK9-203ENST00000480353 FBLP22087 321 aaKnown RBP14.66□□□□□ -0.06
CDK9-203ENST00000480353 ITGA8P53708 1063 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 PRDX1Q06830 199 aaKnown RBP14.66□□□□□ -0.06
CDK9-203ENST00000480353 RBBP7Q16576 425 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 MSS51Q4VC12 460 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 PRMT9Q6P2P2 845 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 CSNK1A1LQ8N752 337 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 EEF1AKMT1Q8WVE0 214 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 LRRC39Q96DD0 335 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 KRT12Q99456 494 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 TRIM54Q9BYV2 358 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 SOX17Q9H6I2 414 aaPredicted RBP14.66□□□□□ -0.06
CDK9-203ENST00000480353 WDR54Q9H977 334 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 ATP13A2Q9NQ11 1180 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 SLAMF7Q9NQ25 335 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 PYCARDQ9ULZ3 195 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 KLK4Q9Y5K2 254 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 BSNQ9UPA5 3926 aa14.66□□□□□ -0.06
CDK9-203ENST00000480353 NUP210LQ5VU65 1888 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 LOC105369274A0A096LPK9 316 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 LOC102723532A0A0G2JNH3 316 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 E7ENX8 843 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 H0YGG7 62 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 GFYI3L273 518 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 AGPSO00116 658 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 IPO13O94829 963 aaKnown RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 PDGFAP04085 211 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ITGA3P26006 1051 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 MLLT10P55197 1068 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 IL2P60568 153 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ARF3P61204 181 aaPredicted RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 TAP2Q03519 686 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 CALCOCO2Q13137 446 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 SP140Q13342 867 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 IGFBP7Q16270 282 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 NKG7Q16617 165 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 NDUFA9Q16795 377 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 DCAF10Q5QP82 559 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 VWA5B1Q5TIE3 1220 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 FAM45BPQ6NSW5 357 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 HIBCHQ6NVY1 386 aaPredicted RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 SHISA6Q6ZSJ9 500 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ANKMY2Q8IV38 441 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 OR4N4Q8N0Y3 316 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 GALNT16Q8N428 558 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 FAM45AQ8TCE6 357 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 TM9SF4Q92544 642 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 MIEF2Q96C03 454 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 LINGO1Q96FE5 620 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 PDLIM2Q96JY6 352 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 CCDC138Q96M89 665 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ZNF285Q96NJ3 590 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 NUDT9Q9BW91 350 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 MFRPQ9BY79 579 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 PCBD2Q9H0N5 130 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 PARVBQ9HBI1 364 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ZFATQ9P243 1243 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 ZNF282Q9UDV7 671 aaPredicted RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 CORO1CQ9ULV4 474 aaPredicted RBP14.65□□□□□ -0.06
CDK9-203ENST00000480353 MED16Q9Y2X0 877 aa14.65□□□□□ -0.06
CDK9-203ENST00000480353 SLC16A5O15375 505 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 NRP2O60462 931 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 VPS4BO75351 444 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 CEACAM4O75871 244 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 AHSGP02765 367 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 UQCRHP07919 91 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 SAT1P21673 171 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 MMP11P24347 488 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 CCND1P24385 295 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 HRH2P25021 359 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 IMPA1P29218 277 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 CASQ1P31415 396 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 GRK3P35626 688 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 FOXL2P58012 376 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 YBX1P67809 324 aaKnown RBP14.64□□□□□ -0.07
CDK9-203ENST00000480353 FOXK1P85037 733 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 PDIA2Q13087 525 aaKnown RBP14.64□□□□□ -0.07
CDK9-203ENST00000480353 RBM20Q5T481 1227 aaKnown RBP14.64□□□□□ -0.07
CDK9-203ENST00000480353 PRAMEF13Q5VWM6 474 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 FBXO42Q6P3S6 717 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 CYHR1Q6ZMK1 362 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 PAQR7Q86WK9 346 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 CNTN4Q8IWV2 1026 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 PRSS58Q8IYP2 241 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 NACC2Q96BF6 587 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 MMABQ96EY8 250 aaPredicted RBP14.64□□□□□ -0.07
CDK9-203ENST00000480353 CRB3Q9BUF7 120 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 SEMA3GQ9NS98 782 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 C5AR2Q9P296 337 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 STOX2Q9P2F5 926 aaPredicted RBP14.64□□□□□ -0.07
CDK9-203ENST00000480353 CTSFQ9UBX1 484 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 VPS4AQ9UN37 437 aa14.64□□□□□ -0.07
CDK9-203ENST00000480353 H7BY64 318 aa14.63□□□□□ -0.07
CDK9-203ENST00000480353 CNOT3O75175 753 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms