RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 SLC26A7Q8TE54 656 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 U2AF1L4Q8WU68 220 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CAPSLQ8WWF8 208 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 TRIB2Q92519 343 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 VPS33AQ96AX1 596 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ISOC1Q96CN7 298 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CALML4Q96GE6 196 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 DCUN1D1Q96GG9 259 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SPATA17Q96L03 361 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CEP170P1Q96L14 293 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 B3GALT6Q96L58 329 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 COG8Q96MW5 612 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ZNF578Q96N58 590 aaPredicted RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SECISBP2Q96T21 854 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CIB1Q99828 191 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 APOL4Q9BPW4 351 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ELOVL1Q9BW60 279 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 AP1M1Q9BXS5 423 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SLC26A6Q9BXS9 759 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 TEX13BQ9BXU2 312 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 MRPL9Q9BYD2 267 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 GCOM2Q9BZD3 368 aaPredicted RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ARHGAP39Q9C0H5 1083 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CLPBQ9H078 707 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 CDC42EP4Q9H3Q1 356 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 DHX33Q9H6R0 707 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 LRRC19Q9H756 370 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 AAMDCQ9H7C9 122 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 GPN2Q9H9Y4 310 aaPredicted RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 UGT1A7Q9HAW7 530 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 UGT1A10Q9HAW8 530 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 UGT1A8Q9HAW9 530 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SCPEP1Q9HB40 452 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SH3GLB2Q9NR46 395 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 FARSBQ9NSD9 589 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 GIMAP4Q9NUV9 329 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SLC38A7Q9NVC3 462 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ASNSD1Q9NWL6 643 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 PKD2L2Q9NZM6 624 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 VPS54Q9P1Q0 977 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 TBC1D14Q9P2M4 693 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 PGAP2Q9UHJ9 254 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ZNF221Q9UK13 617 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 KCND3Q9UK17 655 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 GRID1Q9ULK0 1009 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ARHGAP26Q9UNA1 814 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 EIF3LQ9Y262 564 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 PCDHA10Q9Y5I2 948 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 STON1Q9Y6Q2 735 aa3.96□□□□□ -1.78
CMSS1-204ENST00000479555 ZNF142P52746 1687 aaPredicted RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 MYO5AQ9Y4I1 1855 aaKnown RBP3.96□□□□□ -1.78
CMSS1-204ENST00000479555 SPATA31A5Q5VU36 1347 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 SPATA31A7Q8IWB4 1347 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 ALKQ9UM73 1620 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 UBR1Q8IWV7 1749 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TNRQ92752 1358 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 A0A0G2JND7 137 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PNMA8CA0A1B0GUJ8 204 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 GTPBP10A4D1E9 387 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 EFCAB10A6NFE3 127 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PI4K2BG5E9Z4 385 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PSMD12O00232 456 aaPredicted RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 EEF2KO00418 725 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 MAGEB3O15480 346 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TSPAN3O60637 253 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TOM1O60784 492 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TMCC2O75069 709 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 ATG13O75143 517 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TSC22D2O75157 780 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 TRIM3O75382 744 aaPredicted RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PLEKHA8P1O95397 391 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 CCNE2O96020 404 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PAHP00439 452 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 YES1P07947 543 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 KRT10P13645 584 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 NAGAP17050 411 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 GSTM2P28161 218 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 NDUFS1P28331 727 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 CIITAP33076 1130 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 RXRGP48443 463 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 HARS2P49590 506 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 AGTR2P50052 363 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 AQP4P55087 323 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 YWHAGP61981 247 aaKnown RBP eCLIP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 BST2Q10589 180 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 ILF2Q12905 390 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 EPS8Q12929 822 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 DLG1Q12959 904 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PTK6Q13882 451 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 OASLQ15646 514 aaKnown RBP3.95□□□□□ -1.78
CMSS1-204ENST00000479555 ALX1Q15699 326 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 DGUOKQ16854 277 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 ZNF181Q2M3W8 571 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 RUNDC3AQ59EK9 446 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PPM1LQ5SGD2 360 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 NEK5Q6P3R8 708 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 FAM171BQ6P995 826 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 PLEKHG7Q6ZR37 379 aa3.95□□□□□ -1.78
CMSS1-204ENST00000479555 FAM47EQ6ZV65 393 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms