RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PAX6P26367 422 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PITPNBP48739 271 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNF157P51786 506 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 RBM39Q14498 530 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 WDR72Q3MJ13 1102 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CPTPQ5TA50 214 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RAET1GQ6H3X3 334 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TRAPPC6BQ86SZ2 158 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GKN2Q86XP6 184 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNF440Q8IYI8 595 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR8H3Q8N146 312 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 KLHL36Q8N4N3 616 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ELMOD3Q96FG2 381 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SECISBP2Q96T21 854 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 IL12RB2Q99665 862 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HMX1Q9NP08 348 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC40A1Q9NP59 571 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNF282Q9UDV7 671 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 PCSK1NQ9UHG2 260 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PCDHB10Q9UN67 800 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TMED5Q9Y3A6 229 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 A0A096LPI6 279 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 NFKBIEO00221 500 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SYPP08247 313 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CAPN3P20807 821 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CXCR1P25024 350 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CSTF2P33240 577 aaKnown RBP eCLIP5.31□□□□□ -1.56
USF3-202ENST00000478658 MARCKSL1P49006 195 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RANP62826 216 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 KCNJ2P63252 427 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 HSF1Q00613 529 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 HSPA14Q0VDF9 509 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF460Q14592 562 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 EPHA7Q15375 998 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SATL1Q86VE3 508 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 NCSTNQ92542 709 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 COL26A1Q96A83 441 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 TMEM143Q96AN5 459 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SSX3Q99909 188 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SAMD10Q9BYL1 202 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SLC25A31Q9H0C2 315 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PRDM9Q9NQV7 894 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ABHD10Q9NUJ1 306 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ACTR10Q9NZ32 417 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 FNIP2Q9P278 1114 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 POLR3HQ9Y535 204 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 hCG_1807616A0A1W2PRN6 198 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MANSC4A6NHS7 340 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 MSI1O43347 362 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF821O75541 412 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 AP2A2O94973 939 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PRNPP04156 253 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ANXA8P13928 327 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 IDSP22304 550 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 EPHA3P29320 983 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OXTRP30559 389 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MOGSQ13724 837 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 DRAP1Q14919 205 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 STK11Q15831 433 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 LRRC66Q68CR7 880 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ALKBH2Q6NS38 261 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RFWD3Q6PCD5 774 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SLC36A4Q6YBV0 504 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF574Q6ZN55 896 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 USP49Q70CQ1 688 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GALNT13Q8IUC8 556 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR4N5Q8IXE1 308 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RCBTB1Q8NDN9 531 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF675Q8TD23 568 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CD300LFQ8TDQ1 290 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ERLEC1Q96DZ1 483 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CDK15Q96Q40 435 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 IFT27Q9BW83 186 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CDH20Q9HBT6 801 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ISYNA1Q9NPH2 558 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 DDIT4Q9NX09 232 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MTMR11A4FU01 709 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ELOA3DA6NLF2 546 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 TGDSO95455 350 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MRPL19P49406 292 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 MEOX1P50221 254 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 LRRC14Q15048 493 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ELOA3BQ3SY89 546 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 AGKQ53H12 422 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 FADS6Q8N9I5 356 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ELOA3Q8NG57 546 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR13C5Q8NGS8 318 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR13C2Q8NGS9 318 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF398Q8TD17 642 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 HS6ST2Q96MM7 605 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MRPL57Q9BQC6 102 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 GINS3Q9BRX5 216 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MED18Q9BUE0 208 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CLK4Q9HAZ1 481 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 CD93Q9NPY3 652 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 TOR4AQ9NXH8 423 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms