RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	ABAT	P80404	500 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	NKG7	Q16617	165 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	MUM1	Q2TAK8	710 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	RBM20	Q5T481	1227 aa	Known RBP	13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	TEDDM1	Q5T9Z0	273 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PRMT9	Q6P2P2	845 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PAQR3	Q6TCH7	311 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	MRGPRE	Q86SM8	312 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PAQR7	Q86WK9	346 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	MYO1H	Q8N1T3	1032 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	CLEC1A	Q8NC01	280 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	FDCSP	Q8NFU4	85 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	NACC2	Q96BF6	587 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	CCDC138	Q96M89	665 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PWWP2A	Q96N64	755 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	KRT12	Q99456	494 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	SLC26A1	Q9H2B4	701 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PARVB	Q9HBI1	364 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	ZNF304	Q9HCX3	659 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	P4HTM	Q9NXG6	502 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	GPR83	Q9NYM4	423 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	DOCK10	Q96BY6	2186 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	IGKV1-8	A0A0C4DH67	115 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937		H0YGG7	62 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	UMOD	P07911	640 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	EZR	P15311	586 aa	Known RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	OR1D4	P47884	311 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	EMP3	P54852	163 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	CDKN2D	P55273	166 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	IL2	P60568	153 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	ARF3	P61204	181 aa	Predicted RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	RELA	Q04206	551 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	PDIA2	Q13087	525 aa	Known RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	SP140	Q13342	867 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	PDAP1	Q13442	181 aa	Known RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	FRG1	Q14331	258 aa	Known RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	COLEC12	Q5KU26	742 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	STEAP4	Q687X5	459 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	ZNF425	Q6IV72	752 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	ADCK2	Q7Z695	626 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	HPS6	Q86YV9	775 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	ANKMY2	Q8IV38	441 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	METTL27	Q8N6F8	245 aa	Predicted RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	BBOF1	Q8ND07	529 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	RERG	Q96A58	199 aa	Predicted RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	CABS1	Q96KC9	395 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	NUDT9	Q9BW91	350 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	PLAC1	Q9HBJ0	212 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	NXT1	Q9UKK6	140 aa	Known RBP	13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	PDE10A	Q9Y233	779 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	MAU2	Q9Y6X3	613 aa		13.18	□□□□□ -0.3
HDAC7-222	ENST00000477937	AGPS	O00116	658 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	TXNDC9	O14530	226 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	FANCG	O15287	622 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	SLC16A5	O15375	505 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	KLHL41	O60662	606 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	DPM1	O60762	260 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HIST1H2AD	P20671	130 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	MMP11	P24347	488 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HRH2	P25021	359 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	RPL21	P46778	160 aa	Known RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	FOXL2	P58012	376 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	OCA2	Q04671	838 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	PRTG	Q2VWP7	1150 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	DCAF10	Q5QP82	559 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HECTD2	Q5U5R9	776 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	FAM45BP	Q6NSW5	357 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	TRMT10B	Q6PF06	316 aa	Known RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	COX15	Q7KZN9	410 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	MAATS1	Q7Z4T9	603 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	PPP1R32	Q7Z5V6	425 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	CSNK1A1L	Q8N752	337 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	GPATCH11	Q8N954	259 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	FAM45A	Q8TCE6	357 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	COL26A1	Q96A83	441 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	LINGO1	Q96FE5	620 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	VPS50	Q96JG6	964 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HIST1H2AH	Q96KK5	128 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	HIST1H2AJ	Q99878	128 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	WDR83	Q9BRX9	315 aa	Known RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	H2AFJ	Q9BTM1	129 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	PCBD2	Q9H0N5	130 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	TMEM184C	Q9NVA4	438 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	ZFAT	Q9P243	1243 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	STOX2	Q9P2F5	926 aa	Predicted RBP	13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	SLC17A6	Q9P2U8	582 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	CDC23	Q9UJX2	597 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	ADAMTS6	Q9UKP5	1117 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	CDC14A	Q9UNH5	594 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	VWA7	Q9Y334	891 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	SNX24	Q9Y343	169 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	SCN3A	Q9NY46	2000 aa		13.17	□□□□□ -0.3
HDAC7-222	ENST00000477937	PABPN1L	A6NDY0	278 aa	Known RBP	13.16	□□□□□ -0.3
HDAC7-222	ENST00000477937	FAM187A	A6NFU0	413 aa		13.16	□□□□□ -0.3
HDAC7-222	ENST00000477937		H7BY64	318 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms