RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 SIRT6Q8N6T7 355 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 BRIX1Q8TDN6 353 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 FAM136AQ96C01 138 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 IL22Q9GZX6 179 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 MRPS30Q9NP92 439 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 PLA2G3Q9NZ20 509 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 BFARQ9NZS9 450 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 TRPC4Q9UBN4 977 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 CDC14AQ9UNH5 594 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 ENTPD4Q9Y227 616 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 TRAV17A0A0B4J275 112 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 GOLGA8KD6RF30 607 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 PRSS44E7EML9 344 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 GOLGA8TH3BQL2 631 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.629e-7■■■■■ 34.9
CPSF7-211ENST00000477890 NIPSNAP2O75323 286 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 VPS26AO75436 327 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 MATN4O95460 622 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 F10P00742 488 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 FDXRP22570 491 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 SOX11P35716 441 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 KCNK10P57789 538 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 NAA30Q147X3 362 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 HKDC1Q2TB90 917 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 SP5Q6BEB4 398 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 CES3Q6UWW8 571 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 CSNK1A1LQ8N752 337 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 OR9A1PQ8NGU1 263 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 PSMF1Q92530 271 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 MFSD3Q96ES6 412 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 MMABQ96EY8 250 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 BIRC8Q96P09 236 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 TAAR6Q96RI8 345 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 TRIM56Q9BRZ2 755 aaKnown RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 EIF2B3Q9NR50 452 aaKnown RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 RUVBL1Q9Y265 456 aaKnown RBP11.18□□□□□ -0.62
CPSF7-211ENST00000477890 CPAMD8Q8IZJ3 1885 aa11.18□□□□□ -0.62
CPSF7-211ENST00000477890 IGHV1-45A0A0A0MS14 117 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ARHGEF33A8MVX0 844 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 PHF2O75151 1096 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 WFS1O76024 890 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 VAPBO95292 243 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 BMP10O95393 424 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 SERPINA7P05543 415 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 HEXBP07686 556 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 CELA2AP08217 269 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ANXA5P08758 320 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ERGP11308 486 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 PRF1P14222 555 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 CHRM3P20309 590 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 MGAT1P26572 445 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ARNTP27540 789 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 RPA3P35244 121 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 NPY2RP49146 381 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 TNFSF10P50591 281 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 EMP3P54852 163 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 DSG2Q14126 1118 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 GBX1Q14549 363 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 RNF187Q5TA31 235 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 MRNIPQ6NTE8 343 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 LRRC8BQ6P9F7 803 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 GFRALQ6UXV0 394 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 SDCCAG8Q86SQ7 713 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 PAQR7Q86WK9 346 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 RNF10Q8N5U6 811 aaKnown RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 SMPDL3AQ92484 453 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 NR4A3Q92570 626 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 LPGAT1Q92604 370 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 HAS2Q92819 552 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 MVB12AQ96EY5 273 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 PLCD4Q9BRC7 762 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 UNKQ9C0B0 810 aaKnown RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.17□□□□□ -0.628e-9■■□□□ 12.1
CPSF7-211ENST00000477890 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 SYNPO2LQ9H987 977 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ABCF3Q9NUQ8 709 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 C14orf105Q9NVL8 296 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 RIC8BQ9NVN3 520 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 SYBUQ9NX95 663 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 CRYL1Q9Y2S2 319 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 MRPS2Q9Y399 296 aaKnown RBP11.17□□□□□ -0.62
CPSF7-211ENST00000477890 ABCA12Q86UK0 2595 aa11.17□□□□□ -0.62
CPSF7-211ENST00000477890 A0A0A6YYC8 382 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-211ENST00000477890 IGKV1-8A0A0C4DH67 115 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 A0A1W2PQ72 361 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 E5RI56 91 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 H3BMM5 538 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 I3L1I5 382 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-211ENST00000477890 MYO1CO00159 1063 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 AP3B1O00203 1094 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 PCDH17O14917 1159 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 PFDN6O15212 129 aa11.16□□□□□ -0.62
CPSF7-211ENST00000477890 PSIP1O75475 530 aaKnown RBP11.16□□□□□ -0.62
CPSF7-211ENST00000477890 ESR1P03372 595 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms