RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 THUMPD1Q9NXG2 353 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 ZNF490Q9ULM2 529 aaPredicted RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 MMP2P08253 660 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 SCN1BQ07699 218 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 EFR3AQ14156 821 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 TIMM50Q3ZCQ8 353 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 NOTUMQ6P988 496 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 BHLHA9Q7RTU4 235 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 LIMS2Q7Z4I7 341 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 GALNT10Q86SR1 603 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 TBC1D20Q96BZ9 403 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 UCK2Q9BZX2 261 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 SIRT5Q9NXA8 310 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 KLK4Q9Y5K2 254 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 PDHXO00330 501 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 PLK4O00444 970 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 STX7O15400 261 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 CCNDBP1O95273 360 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 CCNYL3P0C7X3 344 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 CBLP22681 906 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 IDH2P48735 452 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 PIK3CGP48736 1102 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 VLDLRP98155 873 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 MED22Q15528 200 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 VTCN1Q7Z7D3 282 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 RTL3Q8N8U3 475 aaKnown RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 LINGO1Q96FE5 620 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 HRASLS5Q96KN8 279 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 NECTIN4Q96NY8 510 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 MCCC1Q96RQ3 725 aaPredicted RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 SP110Q9HB58 689 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 ABCB8Q9NUT2 735 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 MED16Q9Y2X0 877 aa13.06□□□□□ -0.32
DFFB-209ENST00000477548 TIMM13Q9Y5L4 95 aaPredicted RBP13.06□□□□□ -0.32
DFFB-209ENST00000477548 A0A075B6Q4 140 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 CXCL11O14625 94 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 FFAR3O14843 346 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 GPR42O15529 346 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ERN1O75460 977 aaKnown RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 CSF2P04141 144 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ATXN1LP0C7T5 689 aaKnown RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 ADCYAP1R1P41586 468 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ST3GAL4Q11206 333 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 PTPRNQ16849 979 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 C18orf21Q32NC0 220 aaPredicted RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 ESCO2Q56NI9 601 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ANKRD46Q86W74 232 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 YIPF7Q8N8F6 280 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 SIDT2Q8NBJ9 832 aaKnown RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 COQ8BQ96D53 544 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 C3orf14Q9HBI5 128 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 SARS2Q9NP81 518 aaKnown RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 HECAQ9UBI9 543 aaPredicted RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 TRMT6Q9UJA5 497 aaKnown RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 RGS14O43566 566 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 WDR47O94967 919 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
DFFB-209ENST00000477548 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 BTBD16Q32M84 506 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 SGO1Q5FBB7 561 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 GOLGA7Q7Z5G4 137 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ZNF605Q86T29 641 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 AMIGO1Q86WK6 493 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ZSWIM9Q86XI8 627 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 UBE2J2Q8N2K1 259 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 EEF1AKMT1Q8WVE0 214 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 ASAH2Q9NR71 780 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 RAD18Q9NS91 495 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 OSER1Q9NX31 292 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 TAS2R16Q9NYV7 291 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 SLC45A1Q9Y2W3 748 aa13.05□□□□□ -0.32
DFFB-209ENST00000477548 E5RI56 91 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 E9PAM4 449 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 VPS26AO75436 327 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 PEX11BO96011 259 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
DFFB-209ENST00000477548 GZMMP51124 257 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
DFFB-209ENST00000477548 IL2P60568 153 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 ACVR1Q04771 509 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
DFFB-209ENST00000477548 DMC1Q14565 340 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
DFFB-209ENST00000477548 PCM1Q15154 2024 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms