RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ATP13A5Q4VNC0 1218 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 CHST15Q7LFX5 561 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 NPAS3Q8IXF0 933 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 OR52L1Q8NGH7 329 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 C3orf30Q96M34 536 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TLR9Q9NR96 1032 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ABCB10Q9NRK6 738 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 GADD45GO95257 159 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 CLIC3O95833 236 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 IGLV3-25P01717 112 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 CTSEP14091 401 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TNNI3P19429 210 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 FPGSQ05932 587 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 IL18R1Q13478 541 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 GPR153Q6NV75 609 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 LETMD1Q6P1Q0 360 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 OR14C36Q8NHC7 312 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 COLEC10Q9Y6Z7 277 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ASNA1O43681 348 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 GJB3O75712 270 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 OR6B1O95007 311 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ETV3P41162 512 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 PIK3CBP42338 1070 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 SMU1Q2TAY7 513 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 C18orf21Q32NC0 220 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF773Q6PK81 442 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TMC5Q6UXY8 1006 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 MACC1Q6ZN28 852 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 STON2Q8WXE9 905 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TRMT2BQ96GJ1 504 aaKnown RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 SLCO3A1Q9UIG8 710 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 PPP6CO00743 305 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 SOCS2O14508 198 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 SNAP29O95721 258 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 NR2F6P10588 404 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 CRTC1Q6UUV9 634 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 TSPAN33Q86UF1 283 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FCGR1BQ92637 280 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 TM9SF3Q9HD45 589 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 MYOCOSA0A1B0GUC4 107 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FAM25AB3EWG3 89 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FAM25CB3EWG5 89 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FAM25GB3EWG6 89 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 MUSKO15146 869 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 CMPK1P30085 196 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 CCR8P51685 355 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 PDGFRLQ15198 375 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 C10orf62Q5T681 223 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GRASPQ7Z6J2 395 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GATAD2AQ86YP4 633 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 MMAAQ8IVH4 418 aaKnown RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 SLC34A3Q8N130 599 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 OR10G2Q8NGC3 310 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 ADAMTS15Q8TE58 950 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GLYATL1Q969I3 302 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 HSH2DQ96JZ2 352 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 COPS4Q9BT78 406 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 KAT8Q9H7Z6 458 aaKnown RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 HPRP00739 348 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FMO3P31513 532 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 RPS13P62277 151 aaKnown RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 FAM189BP81408 668 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 CCDC92Q53HC0 331 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 TRIQKQ629K1 86 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 ANKLE1Q8NAG6 615 aa14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GTPBP3Q969Y2 492 aaKnown RBP14.21□□□□□ -0.13
HDAC6-220ENST00000477528 GRXCR2A6NFK2 248 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 JUPP14923 745 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 SPINT3P49223 89 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 CLDN8P56748 225 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 ZNHIT3Q15649 155 aaPredicted RBP14.21□□□□□ -0.14
HDAC6-220ENST00000477528 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 NUDT13Q86X67 352 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 WDR36Q8NI36 951 aaKnown RBP14.21□□□□□ -0.14
HDAC6-220ENST00000477528 SLC5A11Q8WWX8 675 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 C12orf66Q96MD2 445 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 CLSTN3Q9BQT9 956 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 RAB11FIP5Q9BXF6 653 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 SMURF2Q9HAU4 748 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 GALNT8Q9NY28 637 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 TMEM9Q9P0T7 183 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 LYVE1Q9Y5Y7 322 aa14.21□□□□□ -0.14
HDAC6-220ENST00000477528 TSPAN6O43657 245 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SRCP12931 536 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RCAN2Q14206 197 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 METTL2BQ6P1Q9 378 aaKnown RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 VITQ6UXI7 678 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 LRRTM4Q86VH4 590 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 OR9A1PQ8NGU1 263 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 TMEM125Q96AQ2 219 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SPATA7Q9P0W8 599 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SSR3Q9UNL2 185 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 GPR45Q9Y5Y3 372 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms