RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SEMA3GQ9NS98 782 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 INTS7Q9NVH2 962 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 SPATA7Q9P0W8 599 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 MAP10Q9P2G4 905 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 G3BP2Q9UN86 482 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 NOVA2Q9UNW9 492 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 RUVBL1Q9Y265 456 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 MRPS2Q9Y399 296 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 COPG1Q9Y678 874 aaKnown RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 RP1L1Q8IWN7 2480 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CENPEQ02224 2701 aa6.69□□□□□ -1.34
HDAC3-207ENST00000475549 CSMD1Q96PZ7 3565 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 DOPEY1Q5JWR5 2465 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 ITPR2Q14571 2701 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 FAM237BA0A1B0GVD1 139 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 A0A1W2PQ72 361 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 OR2W5A6NFC9 320 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SDR42E2A6NKP2 422 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 H3BMM5 538 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 GOLGA8MH3BSY2 632 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 AP3B1O00203 1094 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 E2F3O00716 465 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 P2RX6O15547 441 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 KIF5CO60282 957 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 WISP2O76076 250 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 IPO13O94829 963 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 HAUS5O94927 633 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 KRT14P02533 472 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 CCDC175P0C221 793 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PIM1P11309 404 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 COX6A1P12074 109 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 OGNP20774 298 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 GABRB3P28472 473 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SLC26A3P40879 764 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 MAGEA3P43357 314 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PNLIPRP1P54315 467 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 EMP3P54852 163 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 MAT1AQ00266 395 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PRDX1Q06830 199 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 DHX34Q14147 1143 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SYT16Q17RD7 645 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 RNF187Q5TA31 235 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PRMT9Q6P2P2 845 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PLD3Q8IV08 490 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 RASGEF1CQ8N431 466 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 OTUD6BQ8N6M0 293 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 TTC29Q8NA56 475 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 FBXO15Q8NCQ5 510 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 TRIM58Q8NG06 486 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 GSDMBQ8TAX9 411 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PPP4R1Q8TF05 950 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 COG1Q8WTW3 980 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SMPDL3AQ92484 453 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 MIEF2Q96C03 454 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 THOC3Q96J01 351 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 FOPNLQ96NB1 174 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SERPINB12Q96P63 405 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 TAAR6Q96RI8 345 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 MACROD1Q9BQ69 325 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 LHPPQ9H008 270 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 ILKAPQ9H0C8 392 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PLAC1Q9HBJ0 212 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF160Q9HCG1 818 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 MRPS30Q9NP92 439 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 FBXO6Q9NRD1 293 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PLA2G3Q9NZ20 509 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF282Q9UDV7 671 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 TAC3Q9UHF0 121 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 C3orf18Q9UK00 162 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 NXT1Q9UKK6 140 aaKnown RBP6.68□□□□□ -1.34
HDAC3-207ENST00000475549 PPP2R2CQ9Y2T4 447 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 CRYBG3Q68DQ2 2970 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 SHANK1Q9Y566 2161 aa6.68□□□□□ -1.34
HDAC3-207ENST00000475549 A0A0A6YYC8 382 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MAGEB16A2A368 324 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 IDSB3KWA1 339 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 H7BY64 318 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 I3L1I5 382 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 HAT1O14929 419 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 JRKO75564 520 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 USP1O94782 785 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 DDAH2O95865 285 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 HPP00738 406 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 STATHP02808 62 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 PRR35P0CG20 571 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MLNP12872 115 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 ACPPP15309 386 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 IMPA1P29218 277 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 CMPK1P30085 196 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SOX11P35716 441 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 COILP38432 576 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SKIV2L2P42285 1042 aaKnown RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SLC1A2P43004 574 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 TSFMP43897 325 aaKnown RBP6.67□□□□□ -1.34
HDAC3-207ENST00000475549 PGGT1BP53609 377 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 MPP1Q00013 466 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 RELAQ04206 551 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 OCA2Q04671 838 aa6.67□□□□□ -1.34
HDAC3-207ENST00000475549 SRSF11Q05519 484 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms