RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF486Q96H40 463 aaPredicted RBP5.43□□□□□ -1.54
SMC5-203ENST00000475540 CPNE1Q99829 537 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 PKP2Q99959 881 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 CCDC3Q9BQI4 270 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 CENPOQ9BU64 300 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 AP1M1Q9BXS5 423 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 FAM170AA1A519 330 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 TADA2AO75478 443 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 ZSCAN5DPP0CG00 497 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 GP1BBP13224 206 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 PRKACGP22612 351 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 VAMP7P51809 220 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 ZNF74Q16587 644 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 TAF1BQ53T94 588 aaPredicted RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 C2CD6Q53TS8 623 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 KRT39Q6A163 491 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 MAML2Q8IZL2 1156 aaPredicted RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 RYBPQ8N488 228 aaPredicted RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 NOA1Q8NC60 698 aaKnown RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 OR7A2PQ8NGA2 310 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 GATAD1Q8WUU5 269 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 GTF3AQ92664 365 aaKnown RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 C4orf45Q96LM5 186 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 LPAR4Q99677 370 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 SLF1Q9BQI6 1058 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 ALDH8A1Q9H2A2 487 aaPredicted RBP5.42□□□□□ -1.54
SMC5-203ENST00000475540 Q9H8V8 135 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 TBC1D7Q9P0N9 293 aa5.42□□□□□ -1.54
SMC5-203ENST00000475540 H0YAE9 185 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 CLDN4O14493 209 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
SMC5-203ENST00000475540 ATP5BP06576 529 aaKnown RBP5.41□□□□□ -1.54
SMC5-203ENST00000475540 CD22P20273 847 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 HLA-FP30511 346 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 TSFMP43897 325 aaKnown RBP5.41□□□□□ -1.54
SMC5-203ENST00000475540 LIMK1P53667 647 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 RBPJQ06330 500 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 AIMP1Q12904 312 aaKnown RBP5.41□□□□□ -1.54
SMC5-203ENST00000475540 EFTUD2Q15029 972 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMC5-203ENST00000475540 MTHFSDQ2M296 383 aaKnown RBP5.41□□□□□ -1.54
SMC5-203ENST00000475540 TMEM266Q2M3C6 531 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 ERMARDQ5T6L9 678 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 C1QTNF12Q5T7M4 302 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 OR4A47Q6IF82 309 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 SLC37A3Q8NCC5 494 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 NUP37Q8NFH4 326 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 FAM222BQ8WU58 562 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 SPAG5Q96R06 1193 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 SH3GLB2Q9NR46 395 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
SMC5-203ENST00000475540 A0A1W2PR80 420 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 SNURFLB1AK76 121 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 ACSL3O95573 720 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 CSN3P07498 182 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 MC5RP33032 325 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 RAB28P51157 221 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 GSCP56915 257 aaPredicted RBP5.4□□□□□ -1.54
SMC5-203ENST00000475540 CSNK2BP67870 215 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 GUCY2DQ02846 1103 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 TRAP1Q12931 704 aaKnown RBP5.4□□□□□ -1.54
SMC5-203ENST00000475540 PLPPR4Q7Z2D5 763 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 OR10Q1Q8NGQ4 319 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 HDAC11Q96DB2 347 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 LINC00615Q96LM1 132 aaPredicted RBP5.4□□□□□ -1.54
SMC5-203ENST00000475540 PIGQQ9BRB3 760 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 NYXQ9GZU5 481 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 NUDT4Q9NZJ9 180 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 TXNDC16Q9P2K2 825 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 THEGQ9P2T0 379 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 SMAD5-AS1Q9Y6J3 95 aa5.4□□□□□ -1.54
SMC5-203ENST00000475540 MEX3AA1L020 520 aaKnown RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 SNX3O60493 162 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 CELF2O95319 508 aaKnown RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 IGHEP01854 428 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 ADRB2P07550 413 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 RPL35AP18077 110 aaKnown RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 IL11P20809 199 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 ZNF10P21506 573 aaPredicted RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 DNA2P51530 1060 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 ELAVL2Q12926 359 aaKnown RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 FASTKD3Q14CZ7 662 aaKnown RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 NPTX1Q15818 432 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 EXT1Q16394 746 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 SNAI3Q3KNW1 292 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 KCTD6Q8NC69 237 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 KCNE4Q8WWG9 221 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 ROBO4Q8WZ75 1007 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 OTUB1Q96FW1 271 aaPredicted RBP5.39□□□□□ -1.55
SMC5-203ENST00000475540 LRRC61Q9BV99 259 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 MED20Q9H944 212 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 GSN-AS1Q9NRJ2 163 aa5.39□□□□□ -1.55
SMC5-203ENST00000475540 CASTOR2A6NHX0 329 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 MPTX1A8MV57 137 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 FPGTO14772 594 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 TEX28O15482 410 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 RPS6KA5O75582 802 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 KRT33AO76009 404 aa5.38□□□□□ -1.55
SMC5-203ENST00000475540 OR52Z1P0C646 297 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms