RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 DSG2Q14126 1118 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 NFE2L1Q14494 772 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 ITIH4Q14624 930 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 CLEC9AQ6UXN8 241 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 PIANPQ8IYJ0 282 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 OR4E2Q8NGC2 313 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 PROKR1Q8TCW9 393 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 NAT14Q8WUY8 206 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 SERPINB12Q96P63 405 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
ATG9A-220ENST00000475339 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
ATG9A-220ENST00000475339 SLC22A11Q9NSA0 550 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 CATSPERZQ9NTU4 200 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF835Q9Y2P0 537 aa13.45□□□□□ -0.26
ATG9A-220ENST00000475339 IGLV3-16A0A075B6K0 115 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 C17orf113A0A1B0GUU1 675 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 SDR42E2A6NKP2 422 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 DNALI1O14645 258 aaPredicted RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 MAP3K7O43318 606 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 AVILO75366 819 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 OR2B3O76000 313 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 AP2A2O94973 939 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 SLC35G4P0C7Q5 338 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 NMBRP28336 390 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 PRDX3P30048 256 aaKnown RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 PMP22Q01453 160 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 TUBB8Q3ZCM7 444 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 DNAJC21Q5F1R6 531 aaKnown RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 RNASEH2BQ5TBB1 312 aaKnown RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 CAND1Q86VP6 1230 aaKnown RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 SPPL2CQ8IUH8 684 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 NAT8LQ8N9F0 302 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 OR2L2Q8NH16 312 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 HM13Q8TCT9 377 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 ZFPM2Q8WW38 1151 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 LINC00615Q96LM1 132 aaPredicted RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 INSM2Q96T92 566 aaPredicted RBP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 KRT12Q99456 494 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 KIFC1Q9BW19 673 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATG9A-220ENST00000475339 ST6GALNAC2Q9UJ37 374 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 ACSL5Q9ULC5 683 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 MAD1L1Q9Y6D9 718 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 AP1M2Q9Y6Q5 423 aa13.44□□□□□ -0.26
ATG9A-220ENST00000475339 GSAPA4D1B5 854 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 FOXO6A8MYZ6 492 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 H3BMH7 237 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 PFDN6O15212 129 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 TTI1O43156 1089 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 HCRTR1O43613 425 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 PRAMEF2O60811 474 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 VAPBO95292 243 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 FTH1P02794 183 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CTSBP07858 339 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 GSTM1P09488 218 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 OR56A5P0C7T3 313 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 TTPAP49638 278 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 GSTM4Q03013 218 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CKAP4Q07065 602 aaKnown RBP13.43□□□□□ -0.26
ATG9A-220ENST00000475339 PCOLCEQ15113 449 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 SYTL3Q4VX76 610 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CES4AQ5XG92 561 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 MRNIPQ6NTE8 343 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CES3Q6UWW8 571 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 C3P1Q6ZMU1 363 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 Q6ZPB1 254 aaPredicted RBP13.43□□□□□ -0.26
ATG9A-220ENST00000475339 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 FAM20CQ8IXL6 584 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CFAP206Q8IYR0 622 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CLDN19Q8N6F1 224 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 OR11G2Q8NGC1 345 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 HAS2Q92819 552 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF669Q96BR6 464 aaPredicted RBP13.43□□□□□ -0.26
ATG9A-220ENST00000475339 MFSD3Q96ES6 412 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 C18orf12Q96KH6 178 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 MESP1Q9BRJ9 268 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 TSSK1BQ9BXA7 367 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 KIR3DX1Q9H7L2 352 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 TREX1Q9NSU2 369 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 PTGFRNQ9P2B2 879 aa13.43□□□□□ -0.26
ATG9A-220ENST00000475339 MAGEB16A2A368 324 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 IFRD1O00458 451 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 NDC80O14777 642 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 CD3EAPO15446 510 aaKnown RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 ZNHIT1O43257 154 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 NDUFS3O75489 264 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 ZWINTO95229 277 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 POLBP06746 335 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms