RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 WDR45BQ5MNZ6 344 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PAOXQ6QHF9 649 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 TAF8Q7Z7C8 310 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 TRIM48Q8IWZ4 208 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 KRT78Q8N1N4 520 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 ARHGAP24Q8N264 748 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 LINC01555Q8NAE3 123 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 OR7G3Q8NG95 312 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 UBE2E3Q969T4 207 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 NECAB3Q96P71 396 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 SLC25A23Q9BV35 468 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 ACAT2Q9BWD1 397 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 DUSP15Q9H1R2 295 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 BRF2Q9HAW0 419 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PRMT8Q9NR22 394 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 GEMIN8Q9NWZ8 242 aaKnown RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 ZIM2Q9NZV7 527 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 CCDC167Q9P0B6 97 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 TAAR2Q9P1P5 351 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 ZNF624Q9P2J8 865 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 APOBEC3BQ9UH17 382 aaKnown RBP13.25□□□□□ -0.29
TRAF4-210ENST00000475329 KLF15Q9UIH9 416 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
TRAF4-210ENST00000475329 SPAG17Q6Q759 2223 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 OR5K4A6NMS3 321 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 TLR4O00206 839 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NR5A2O00482 541 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 SEC22BO75396 215 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CCNDBP1O95273 360 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 SNRPB2P08579 225 aaKnown RBP13.24□□□□□ -0.29
TRAF4-210ENST00000475329 KRT16P08779 473 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NME1P15531 152 aaKnown RBP13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CXCR2P25025 360 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 MAOBP27338 520 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 PSMB5P28074 263 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 MAPK1P28482 360 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CPOXP36551 454 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 FNTBP49356 437 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NUDT2P50583 147 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NME5P56597 212 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 STX5Q13190 355 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 DDX39BQ13838 428 aaKnown RBP13.24□□□□□ -0.29
TRAF4-210ENST00000475329 RFTN2Q52LD8 501 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CACHD1Q5VU97 1274 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 IL23RQ5VWK5 629 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 ICE2Q659A1 982 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 IYDQ6PHW0 289 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 WDR5BQ86VZ2 330 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 LONP2Q86WA8 852 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 LAS2Q8IYD9 372 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 TMEFF1Q8IYR6 380 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 OR9I1Q8NGQ6 314 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 FBXO27Q8NI29 283 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 DNASE2BQ8WZ79 361 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 RCN3Q96D15 328 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NRTNQ99748 197 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 AIF1LQ9BQI0 150 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 LRRC61Q9BV99 259 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
TRAF4-210ENST00000475329 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 NDE1Q9NXR1 346 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 TRIOO75962 3097 aa13.24□□□□□ -0.29
TRAF4-210ENST00000475329 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 KIR2DS5A0A0G2JLQ3 304 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 PRAMEF33A0A0G2JMD5 474 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 A0A0G2JNG1 304 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 BBIP1A8MTZ0 92 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 KIR2DS3K7RE56 304 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 AIM2O14862 343 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 GSC2O15499 205 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 CELA2BP08218 269 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-210ENST00000475329 ACPPP15309 386 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 CD1EP15812 388 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 XRCC1P18887 633 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-210ENST00000475329 ITGAXP20702 1163 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 SLC19A1P41440 591 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 CCR8P51685 355 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 KIR2DS5Q14953 304 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 PLCL1Q15111 1095 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 PRRT3Q5FWE3 981 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 REP15Q6BDI9 236 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 TSSK4Q6SA08 328 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 C16orf89Q6UX73 402 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 FAM9CQ8IZT9 166 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 ABHD11Q8NFV4 315 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 HUS1BQ8NHY5 278 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 ZFPM2Q8WW38 1151 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 METTL2AQ96IZ6 378 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms