RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PDK1Q15118 436 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CHRNA6Q15825 494 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PAN2Q504Q3 1202 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PAN3Q58A45 887 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM47AQ5JRC9 791 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TOR1AIP1Q5JTV8 583 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CLLU1Q5K131 121 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TTC38Q5R3I4 469 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 STXBP5Q5T5C0 1151 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PRAMEF9Q5VWM5 478 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 MLIPQ5VWP3 458 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 ANKS6Q68DC2 871 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 KRT39Q6A163 491 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 C11orf63Q6NUN7 778 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 DPY19L2P1Q6NXN4 242 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 NAPRTQ6XQN6 538 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 LIPIQ6XZB0 460 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TMEM26Q6ZUK4 368 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 RRAGAQ7L523 313 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 COPS6Q7L5N1 327 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SLCO6A1Q86UG4 719 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TRABD2AQ86V40 505 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 LRRTM4Q86VH4 590 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SIAH1Q8IUQ4 282 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 FOXP4Q8IVH2 680 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CENPLQ8N0S6 344 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 MYCT1Q8N699 235 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PACRGLQ8N7B6 248 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TMEM35BQ8NCS4 154 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 OR4M2Q8NGB6 313 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 OR6X1Q8NH79 312 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SHKBP1Q8TBC3 707 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SETD6Q8TBK2 473 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PHF10Q8WUB8 498 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CLEC4DQ8WXI8 215 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 RBPMSQ93062 196 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 HHIPL1Q96JK4 782 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM71F1Q96KD3 344 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 BTN2A3PQ96KV6 586 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 KCNK16Q96T55 309 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SORT1Q99523 831 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 SYT17Q9BSW7 474 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TMEM121Q9BTD3 319 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 KLHL31Q9H511 634 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CYP3A43Q9HB55 503 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 GLOD4Q9HC38 313 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 ASCL3Q9NQ33 180 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 EQTNQ9NQ60 294 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 OLAHQ9NV23 265 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 MCUBQ9NWR8 336 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 DPP3Q9NY33 737 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 TREM2Q9NZC2 230 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 NDUFAF4Q9P032 175 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 COPZ2Q9P299 210 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 CFAP97Q9P2B7 532 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 MYOTQ9UBF9 498 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PCYOX1Q9UHG3 505 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 KLHL21Q9UJP4 597 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 VPS28Q9UK41 221 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 MKLN1Q9UL63 735 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 RNF11Q9Y3C5 154 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 PCDHGB1Q9Y5G3 927 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 DUSP10Q9Y6W6 482 aa5.83□□□□□ -1.48
ECHDC1-215ENST00000475319 RPTORQ8N122 1335 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 USP42Q9H9J4 1324 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 TNS2Q63HR2 1409 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 A0A0U1RQV5 110 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 A0A1B0GV90 55 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 DENND3A2RUS2 1198 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 KRT87PA6NCN2 255 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ANKDD1BA6NHY2 528 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 SLC15A5A6NIM6 579 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 METTL15A6NJ78 407 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 MPTX1A8MV57 137 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 H0YIN7 160 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ACOT7O00154 380 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ITGB1BP1O14713 200 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ADAM12O43184 909 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM189A1O60320 539 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 TLR5O60602 858 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 MAFKO60675 156 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 STX11O75558 287 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 GPX5O75715 221 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 SLC22A3O75751 556 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ENDOD1O94919 500 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 TOP3BO95985 862 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 KLK3P07288 261 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 RRASP10301 218 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 IFI30P13284 250 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 MYF5P13349 255 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 CD36P16671 472 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 GLRA2P23416 452 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 CSKP41240 450 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 CRATP43155 626 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 PIK3CGP48736 1102 aa5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 TOB1P50616 345 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 ANXA11P50995 505 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-215ENST00000475319 MAP2K6P52564 334 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms