RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SKA2Q8WVK7 121 aaPredicted RBP14.9□□□□□ -0.02
SRRT-209ENST00000474896 RAB11FIP5Q9BXF6 653 aa14.9□□□□□ -0.02
SRRT-209ENST00000474896 DDX47Q9H0S4 455 aaKnown RBP14.9□□□□□ -0.02
SRRT-209ENST00000474896 PTGFRNQ9P2B2 879 aa14.9□□□□□ -0.02
SRRT-209ENST00000474896 MRFAP1Q9Y605 127 aa14.9□□□□□ -0.02
SRRT-209ENST00000474896 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
SRRT-209ENST00000474896 TEP1Q99973 2627 aaKnown RBP14.9□□□□□ -0.02
SRRT-209ENST00000474896 DYTNA2CJ06 578 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 KRT87PA6NCN2 255 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 E7EVH7 732 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 CCDC188H7C350 402 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 PRMT5O14744 637 aaPredicted RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 NRP2O60462 931 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 IFNB1P01574 187 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 FDFT1P37268 417 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 BDKRB1P46663 353 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 PTRHD1Q6GMV3 140 aaKnown RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 FBXO42Q6P3S6 717 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 NDUFAF7Q7L592 441 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 GSTA5Q7RTV2 222 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 ZNF572Q7Z3I7 529 aaPredicted RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 MCEMP1Q8IX19 187 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 RAB42Q8N4Z0 105 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 SPATA4Q8NEY3 305 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 OR2L3Q8NG85 312 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 BRIX1Q8TDN6 353 aaKnown RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 PSMF1Q92530 271 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 RELTQ969Z4 430 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 MOCOSQ96EN8 888 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 PHF12Q96QT6 1004 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 TAAR6Q96RI8 345 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 TRIM56Q9BRZ2 755 aaKnown RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 YIPF2Q9BWQ6 316 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 CATSPERZQ9NTU4 200 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 MARCH4Q9P2E8 410 aaPredicted RBP14.89□□□□□ -0.03
SRRT-209ENST00000474896 TCAF1Q9Y4C2 921 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 KLK4Q9Y5K2 254 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 FAM169AQ9Y6X4 670 aa14.89□□□□□ -0.03
SRRT-209ENST00000474896 CSMD1Q96PZ7 3565 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 NSG1A0A0A6YYJ2 146 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 PCDH17O14917 1159 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 USP1O94782 785 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 PRR35P0CG20 571 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 POU3F2P20265 443 aaPredicted RBP14.88□□□□□ -0.03
SRRT-209ENST00000474896 EMP2P54851 167 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 YBX1P67809 324 aaKnown RBP14.88□□□□□ -0.03
SRRT-209ENST00000474896 AARS2Q5JTZ9 985 aaKnown RBP14.88□□□□□ -0.03
SRRT-209ENST00000474896 PRUNE1Q86TP1 453 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 KLHL7Q8IXQ5 586 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 SIRT6Q8N6T7 355 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 CCDC89Q8N998 374 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 OR2A1Q8NGT9 310 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 HAS2Q92819 552 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 PANX3Q96QZ0 392 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 RUBCNLQ9H714 662 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 CHRAC1Q9NRG0 131 aa14.88□□□□□ -0.03
SRRT-209ENST00000474896 RUVBL2Q9Y230 463 aaKnown RBP14.88□□□□□ -0.03
SRRT-209ENST00000474896 IGLV3-12A0A075B6K2 115 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 TRAV17A0A0B4J275 112 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 A0A1W2PPV9 198 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 KPNA5O15131 536 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 CD3EAPO15446 510 aaKnown RBP14.87□□□□□ -0.03
SRRT-209ENST00000474896 F10P00742 488 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 ERVK-10P10266 1014 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 COX6A1P12074 109 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 ETS1P14921 441 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 FBLP22087 321 aaKnown RBP14.87□□□□□ -0.03
SRRT-209ENST00000474896 CXCR2P25025 360 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 SOX11P35716 441 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 TTPAP49638 278 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 TNFSF10P50591 281 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 TDGF1P3P51864 188 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 FASTKQ14296 549 aaKnown RBP14.87□□□□□ -0.03
SRRT-209ENST00000474896 MUM1Q2TAK8 710 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 FAAH2Q6GMR7 532 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 GFRALQ6UXV0 394 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 RNF44Q7L0R7 432 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 OTOAQ7RTW8 1153 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 PPHLN1Q8NEY8 458 aaKnown RBP14.87□□□□□ -0.03
SRRT-209ENST00000474896 HMGCLL1Q8TB92 370 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 GRK7Q8WTQ7 553 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 NR4A3Q92570 626 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 C10orf90Q96M02 699 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 FOPNLQ96NB1 174 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.87□□□□□ -0.03
SRRT-209ENST00000474896 P2RY12Q9H244 342 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 RAB6BQ9NRW1 208 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 TRPC4Q9UBN4 977 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 GNPTGQ9UJJ9 305 aa14.87□□□□□ -0.03
SRRT-209ENST00000474896 IDSB3KWA1 339 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 H0YGG7 62 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 FFAR3O14843 346 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 GPR42O15529 346 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 NDUFS3O75489 264 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 WFS1O76024 890 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 SERPINA7P05543 415 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 ZSCAN5DPP0CG00 497 aa14.86□□□□□ -0.03
SRRT-209ENST00000474896 GRNP28799 593 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms