RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 OTOAQ7RTW8 1153 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 OTUD6BQ8N6M0 293 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 UBL4BQ8N7F7 174 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 SUN3Q8TAQ9 357 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 PSMF1Q92530 271 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 CALR3Q96L12 384 aaKnown RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 PANX3Q96QZ0 392 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 ZFYVE21Q9BQ24 234 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 DPH7Q9BTV6 452 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 ENAMQ9NRM1 1142 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 RIC8BQ9NVN3 520 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 GNPTGQ9UJJ9 305 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 AMFRQ9UKV5 643 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 TCAF1Q9Y4C2 921 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 KLF2Q9Y5W3 355 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 MRFAP1Q9Y605 127 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 TCRBV7S2A1N4TA0A589 114 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ERI2A8K979 691 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 PRMT5O14744 637 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 WDPCPO95876 746 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 IFNB1P01574 187 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 SERPINA7P05543 415 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ITGAMP11215 1152 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 MST1P26927 711 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 CMPK1P30085 196 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 TTPAP49638 278 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 EIF3BP55884 814 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 RIPPLY3P57055 190 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 YBX1P67809 324 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 PMP22Q01453 160 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ACVR1Q04771 509 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 RBPJQ06330 500 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 FASTKQ14296 549 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 PEX26Q7Z412 305 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ZNF808Q8N4W9 903 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 OR2A1Q8NGT9 310 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 SLC35B2Q8TB61 432 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 HAS2Q92819 552 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 MMABQ96EY8 250 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 KCNF1Q9H3M0 494 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 C14orf105Q9NVL8 296 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 ITGB1BP2Q9UKP3 347 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
CCDC78-209ENST00000474647 RUVBL1Q9Y265 456 aaKnown RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-209ENST00000474647 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 H0YGG7 62 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 KPNA5O15131 536 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CD3EAPO15446 510 aaKnown RBP13.3□□□□□ -0.28
CCDC78-209ENST00000474647 VPS26AO75436 327 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 BMP10O95393 424 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 FTCDO95954 541 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ANXA5P08758 320 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 PTGER4P35408 488 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CCNFP41002 786 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CA7P43166 264 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ZNF33BQ06732 778 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 KLF1Q13351 362 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-209ENST00000474647 DSG2Q14126 1118 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 HKDC1Q2TB90 917 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ABHD17BQ5VST6 288 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 MTFR2Q6P444 385 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 SUSD1Q6UWL2 747 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CSNK1A1LQ8N752 337 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 AMER2Q8N7J2 671 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 LRRC57Q8N9N7 239 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ACRBPQ8NEB7 543 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 MAGEC3Q8TD91 643 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 FAM136AQ96C01 138 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 LURAP1Q96LR2 239 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 MRPS30Q9NP92 439 aaKnown RBP13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 RIMKLBQ9ULI2 386 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 KLK4Q9Y5K2 254 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 HIVEP1P15822 2718 aa13.3□□□□□ -0.28
CCDC78-209ENST00000474647 CCDC168Q8NDH2 2452 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 A0A1W2PPV9 198 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 OR2A25A4D2G3 310 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 NDUFS3O75489 264 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 SUN1O94901 812 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 RPA3P35244 121 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-209ENST00000474647 FDFT1P37268 417 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 CASP6P55212 293 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 NAA25Q14CX7 972 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 PCOLCEQ15113 449 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 SYT16Q17RD7 645 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 MFSD4BQ5TF39 518 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
CCDC78-209ENST00000474647 RIPOR1Q6ZS17 1223 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms