RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ITGAXP20702 1163 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 SAT1P21673 171 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 ATP5DP30049 168 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 SSTR1P30872 391 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 GRIA3P42263 894 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 MAGEA4P43358 317 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 RGS4P49798 205 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 CLCN7P51798 805 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 PDAP1Q13442 181 aaKnown RBP14.5□□□□□ -0.09
VARS-223ENST00000474643 FRG1Q14331 258 aaKnown RBP14.5□□□□□ -0.09
VARS-223ENST00000474643 NAA25Q14CX7 972 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 JMJD6Q6NYC1 403 aaPredicted RBP14.5□□□□□ -0.09
VARS-223ENST00000474643 ZDHHC24Q6UX98 284 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 C3orf62Q6ZUJ4 267 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 STRA8Q7Z7C7 330 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 GALNT16Q8N428 558 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 DNAJC22Q8N4W6 341 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 LMNTD1Q8N9Z9 388 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 LINC01555Q8NAE3 123 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 FLVCR1-AS1Q8TAF5 88 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 COL26A1Q96A83 441 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 MIPEPQ99797 713 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 PLAC1Q9HBJ0 212 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 DHRS7Q9Y394 339 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 PCM1Q15154 2024 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 FLNCQ14315 2725 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 KLF7O75840 302 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 FKBP9O95302 570 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 C1orf105O95561 183 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 SYF2O95926 243 aaKnown RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 EIF2S1P05198 315 aaKnown RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 UQCRHP07919 91 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 GSTA2P09210 222 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 TPBGLP0DKB5 382 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 SPTBP11277 2137 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 ENO3P13929 434 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 ITGA3P26006 1051 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 SKIV2L2P42285 1042 aaKnown RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 CD97P48960 835 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 VSX2P58304 361 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 FAM214AQ32MH5 1076 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 RBM20Q5T481 1227 aaKnown RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 FHL5Q5TD97 284 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 YOD1Q5VVQ6 348 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 ZNF385CQ66K41 422 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 FAM45BPQ6NSW5 357 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 CPNE9Q8IYJ1 553 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 IQCKQ8N0W5 287 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 METTL27Q8N6F8 245 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 GALNT11Q8NCW6 608 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 FAM45AQ8TCE6 357 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 SLC30A3Q99726 388 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 ATP13A2Q9NQ11 1180 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 CUTCQ9NTM9 273 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 P4HTMQ9NXG6 502 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 KLHL42Q9P2K6 505 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 CORO1CQ9ULV4 474 aaPredicted RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 RELNP78509 3460 aa14.49□□□□□ -0.09
VARS-223ENST00000474643 TNRC6AQ8NDV7 1962 aaKnown RBP14.49□□□□□ -0.09
VARS-223ENST00000474643 PABPN1LA6NDY0 278 aaKnown RBP14.48□□□□□ -0.09
VARS-223ENST00000474643 ZNF839A8K0R7 811 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 DSCR3O14972 297 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 CEACAM4O75871 244 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 CTSBP07858 339 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 MPC1LP0DKB6 136 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 GNLYP22749 145 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 GABRB3P28472 473 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 CMPK1P30085 196 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 RPA3P35244 121 aaPredicted RBP14.48□□□□□ -0.09
VARS-223ENST00000474643 GABRA4P48169 554 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 SLC12A2P55011 1212 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 MYBPC3Q14896 1274 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 DCAF10Q5QP82 559 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 TEX35Q5T0J7 233 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 HECTD2Q5U5R9 776 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 SLC6A19Q695T7 634 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 LRRC8EQ6NSJ5 796 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 WDR93Q6P2C0 686 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 GALNT7Q86SF2 657 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 SLC26A11Q86WA9 606 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 RELL1Q8IUW5 271 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 CTAGE3PQ8IX95 158 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 MYO1HQ8N1T3 1032 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 GIMAP7Q8NHV1 300 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 CD200R1Q8TD46 325 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 PNPLA2Q96AD5 504 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 ZUFSPQ96AP4 578 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 FKBP10Q96AY3 582 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 ACAT2Q9BWD1 397 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 MLXIPLQ9NP71 852 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 ZDHHC18Q9NUE0 388 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 ABCF3Q9NUQ8 709 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 UTP6Q9NYH9 597 aaKnown RBP14.48□□□□□ -0.09
VARS-223ENST00000474643 MOCS1Q9NZB8 636 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 C5AR2Q9P296 337 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 NXT1Q9UKK6 140 aaKnown RBP14.48□□□□□ -0.09
VARS-223ENST00000474643 SNRNP200O75643 2136 aaKnown RBP14.48□□□□□ -0.09
VARS-223ENST00000474643 PTPN13Q12923 2485 aa14.48□□□□□ -0.09
VARS-223ENST00000474643 AGPSO00116 658 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 ZBTB14O43829 449 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms