RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DBF4BQ8NFT6 615 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 HAS2Q92819 552 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 HAUS1Q96CS2 278 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 DAZAP1Q96EP5 407 aaKnown RBP5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 B3GALT6Q96L58 329 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 SNX22Q96L94 193 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 LRFN5Q96NI6 719 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 TAAR6Q96RI8 345 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 CTRCQ99895 268 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 CEP41Q9BYV8 373 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 HOXD1Q9GZZ0 328 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 TOLLIPQ9H0E2 274 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 P2RY12Q9H244 342 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 RIOX1Q9H6W3 641 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 CAB39LQ9H9S4 337 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 RPF1Q9H9Y2 349 aaKnown RBP5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 FN3KRPQ9HA64 309 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 RNPEPL1Q9HAU8 725 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 PARPBPQ9NWS1 579 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 TXNDC16Q9P2K2 825 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 MAGEL2Q9UJ55 1249 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 NUP50Q9UKX7 468 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 TCFL5Q9UL49 500 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 PALD1Q9ULE6 856 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 RAD54BQ9Y620 910 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 ZHX2Q9Y6X8 837 aa5.91□□□□□ -1.46
SMARCE1-208ENST00000474246 A0A0J9YVX5 310 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 LRRN3E7EW58 273 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 RNF225M0QZC1 329 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 STX16O14662 325 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PJA2O43164 708 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 GPAA1O43292 621 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 UNC5CO95185 931 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 MATN4O95460 622 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 FGBP02675 491 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 GP1BBP13224 206 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 NR1D1P20393 614 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PON1P27169 355 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 CASP14P31944 242 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 DAOAP59103 153 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 KCNMA1Q12791 1236 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 BAATQ14032 418 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 FAM189A2Q15884 450 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 CA9Q16790 459 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 USP41Q3LFD5 358 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 TRIM60Q495X7 471 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SEL1L2Q5TEA6 688 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PLCXD3Q63HM9 321 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 ARL6IP4Q66PJ3 421 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 FSTL4Q6MZW2 842 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 GPAT2Q6NUI2 795 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 MSANTD2Q6P1R3 559 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 ZPBP2Q6X784 338 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SMIM15Q7Z3B0 74 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SERPINA12Q8IW75 414 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PDIK1LQ8N165 341 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 UBE2J2Q8N2K1 259 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 LRRC17Q8N6Y2 441 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 WDR48Q8TAF3 677 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SUN3Q8TAQ9 357 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 GRAPLQ8TC17 118 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PHYHIPQ92561 330 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 AKAP1Q92667 903 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SAT2Q96F10 170 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 LINGO1Q96FE5 620 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 TOE1Q96GM8 510 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SLC41A3Q96GZ6 507 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 INTS4Q96HW7 963 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SH2D3AQ9BRG2 576 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SEC22CQ9BRL7 303 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 FAM213AQ9BRX8 229 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 CENPKQ9BS16 269 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 CDADC1Q9BWV3 514 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 DGCR6LQ9BY27 220 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 PRRG3Q9BZD7 231 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 LRRN3Q9H3W5 708 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SLC32A1Q9H598 525 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 GDE1Q9NZC3 331 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 DKK4Q9UBT3 224 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 CYP8B1Q9UNU6 501 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 HYOU1Q9Y4L1 999 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SPTAN1Q13813 2472 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 A0A1W2PP64 1363 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 RFX7Q2KHR2 1363 aa5.9□□□□□ -1.46
SMARCE1-208ENST00000474246 SLC22A31A6NKX4 558 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 BTBD18B2RXH4 712 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 FBP2O00757 339 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 GRID2O43424 1007 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 TNFSF14O43557 240 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 HCN1O60741 890 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 TULP3O75386 442 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SAP30O75446 220 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 NDUFS3O75489 264 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 CCNKO75909 580 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 OAZ2O95190 189 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 AHSGP02765 367 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 TP53P04637 393 aaPredicted RBP5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 IFNA16P05015 189 aa5.9□□□□□ -1.47
SMARCE1-208ENST00000474246 SERPINA5P05154 406 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms