RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 FCRL4Q96PJ5 515 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 CNOT10Q9H9A5 744 aaKnown RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 CUEDC1Q9NWM3 386 aaPredicted RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 EURLQ9NYK6 297 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 IGKV1-8A0A0C4DH67 115 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 A0A0J9YVX5 310 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 OR2A25A4D2G3 310 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 UBXN8O00124 270 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 KLK10O43240 276 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 CTSVO60911 334 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 IPO13O94829 963 aaKnown RBP11.91□□□□□ -0.5
DDX56-209ENST00000473924 TIAF1O95411 115 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 NTRK1P04629 796 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 RBP1P09455 135 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 CDH1P12830 882 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 GFAPP14136 432 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 NPPBP16860 134 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 EIF2S3P41091 472 aaKnown RBP11.91□□□□□ -0.5
DDX56-209ENST00000473924 KCNC1P48547 511 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ZXDCQ2QGD7 858 aaPredicted RBP11.91□□□□□ -0.5
DDX56-209ENST00000473924 C18orf21Q32NC0 220 aaPredicted RBP11.91□□□□□ -0.5
DDX56-209ENST00000473924 PDPRQ8NCN5 879 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ACMSDQ8TDX5 336 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ATOH8Q96SQ7 321 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ZFYVE21Q9BQ24 234 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 SPRTNQ9H040 489 aaPredicted RBP11.91□□□□□ -0.5
DDX56-209ENST00000473924 TMEM184CQ9NVA4 438 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ZNF358Q9NW07 568 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 ZMIZ1Q9ULJ6 1067 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 KCNE2Q9Y6J6 123 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
DDX56-209ENST00000473924 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 TAF4O00268 1085 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TAPBPO15533 448 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 HCRTR1O43613 425 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 NRP2O60462 931 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 CCNT2O60583 730 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 RAD1O60671 282 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 SRPX2O60687 465 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 CPNE3O75131 537 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 STK16O75716 305 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 PYGBP11216 843 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 EZRP15311 586 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 ZNF28P17035 718 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 GRK3P35626 688 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 GDF5P43026 501 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 GABRA4P48169 554 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 HSPA7P48741 367 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 CCR8P51685 355 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 VSX2P58304 361 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 RASA2Q15283 850 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TGIF1Q15583 401 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 ST3GAL2Q16842 350 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 PFKFB4Q16877 469 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 FBXO48Q5FWF7 155 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TCTE1Q5JU00 501 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 ZNF425Q6IV72 752 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 C6orf15Q6UXA7 325 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 RNF44Q7L0R7 432 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 PAQR7Q86WK9 346 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 CACNA2D3Q8IZS8 1091 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 NLGN4XQ8N0W4 816 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 RIBC1Q8N443 379 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 IL22RA1Q8N6P7 574 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 GALNT6Q8NCL4 622 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 NLGN4YQ8NFZ3 816 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 SLC5A11Q8WWX8 675 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 RERGQ96A58 199 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 ESAMQ96AP7 390 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 CLIP3Q96DZ5 547 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 GPR78Q96P69 363 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TMEM79Q9BSE2 394 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 ROPN1BQ9BZX4 212 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 ROPN1Q9HAT0 212 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 PTBP2Q9UKA9 531 aaKnown RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 PILRAQ9UKJ1 303 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 SH2B3Q9UQQ2 575 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
DDX56-209ENST00000473924 PCDHB3Q9Y5E6 796 aa11.9□□□□□ -0.5
DDX56-209ENST00000473924 AP1M2Q9Y6Q5 423 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms