RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 I3L1I5 382 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-209ENST00000473421 QSOX1O00391 747 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 ADAM10O14672 748 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 P2RX6O15547 441 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 STK10O94804 968 aaKnown RBP11.96□□□□□ -0.49
TRAF4-209ENST00000473421 CTNNA2P26232 953 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 SLC26A3P40879 764 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 COPS2P61201 443 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 PLOD1Q02809 727 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-209ENST00000473421 ZNF33BQ06732 778 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-209ENST00000473421 TSTD2Q5T7W7 516 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 PRMT9Q6P2P2 845 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 LRRC8BQ6P9F7 803 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 SUSD1Q6UWL2 747 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 LANCL3Q6ZV70 420 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 FGD2Q7Z6J4 655 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 CDH24Q86UP0 819 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 ACBD4Q8NC06 268 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 DNAJB8Q8NHS0 232 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 CARD6Q9BX69 1037 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 LRRC40Q9H9A6 602 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 KLHL1Q9NR64 748 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 GALPQ9UBC7 116 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 EFR3BQ9Y2G0 817 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 SEC24DO94855 1032 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-209ENST00000473421 CRYABP02511 175 aaKnown RBP11.95□□□□□ -0.5
TRAF4-209ENST00000473421 SSTR2P30874 369 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 PTPN7P35236 360 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 CSNK1G2P78368 415 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 TLE4Q04727 773 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 ACVR1Q04771 509 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-209ENST00000473421 DSG2Q14126 1118 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 MUM1Q2TAK8 710 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF766Q5HY98 468 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.95□□□□□ -0.5
TRAF4-209ENST00000473421 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 SPPL2CQ8IUH8 684 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 CEP97Q8IW35 865 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 BEST3Q8N1M1 668 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 OR4L1Q8NH43 312 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 ASZ1Q8WWH4 475 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 MMABQ96EY8 250 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-209ENST00000473421 ZFYVE21Q9BQ24 234 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 RNF32Q9H0A6 362 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 P2RY12Q9H244 342 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 RIC8BQ9NVN3 520 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 MKL2Q9ULH7 1088 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 MEMO1Q9Y316 297 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 PCDHA13Q9Y5I0 950 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 HRH3Q9Y5N1 445 aa11.95□□□□□ -0.5
TRAF4-209ENST00000473421 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 SCN3AQ9NY46 2000 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 NPIPA5E9PKD4 350 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 KDM1AO60341 852 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 CLDN14O95500 239 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 APOA4P06727 396 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 HEXBP07686 556 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-209ENST00000473421 FDXRP22570 491 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 CXCR2P25025 360 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 CD96P40200 585 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 NR0B1P51843 470 aaKnown RBP11.94□□□□□ -0.5
TRAF4-209ENST00000473421 TUBA3CQ13748 450 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 TRIM14Q14142 442 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 SPINK14Q6IE38 97 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 TUBA3EQ6PEY2 450 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 AFTPHQ6ULP2 937 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 Q6ZPB1 254 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-209ENST00000473421 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 SIAH3Q8IW03 269 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 CSNK1A1LQ8N752 337 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 OR6P1Q8NGX9 317 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 HMGCLL1Q8TB92 370 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 NRGNQ92686 78 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 CCDC138Q96M89 665 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 GPR137Q96N19 417 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 ALS2CR12Q96Q35 445 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 MACROD1Q9BQ69 325 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 TGIF2Q9GZN2 237 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 VN1R1Q9GZP7 353 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 NPIPA1Q9UND3 350 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAF4-209ENST00000473421 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 DNHD1Q96M86 4753 aa11.94□□□□□ -0.5
TRAF4-209ENST00000473421 ZNF469Q96JG9 3925 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-209ENST00000473421 UQCRHP07919 91 aa11.93□□□□□ -0.5
TRAF4-209ENST00000473421 F7P08709 466 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms