RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	GATM	P50440	423 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	AP2S1	P53680	142 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	RPS14	P62263	151 aa	Known RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	LSM3	P62310	102 aa	Known RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	IFITM3	Q01628	133 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	SIM2	Q14190	667 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	USP39	Q53GS9	565 aa	Known RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ARMC12	Q5T9G4	340 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZDHHC21	Q8IVQ6	265 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	TMEM132C	Q8N3T6	1108 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZBTB2	Q8N680	514 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	RORB	Q92753	470 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	RIBC2	Q9H4K1	309 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ANKH	Q9HCJ1	492 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	AASS	Q9UDR5	926 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	TRPS1	Q9UHF7	1281 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	TRBV5-3	A0A0A0MS03	114 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	MANSC4	A6NHS7	340 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	CENPX	A8MT69	81 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	SLC16A6	O15403	523 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF682	O95780	498 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	B3GALT4	O96024	378 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	EBLN1	P0CF75	366 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ITGAL	P20701	1170 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	FSHR	P23945	695 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ALDH4A1	P30038	563 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	S100A3	P33764	101 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	RYK	P34925	604 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	PPP5C	P53041	499 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	DGUOK	Q16854	277 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ADGRF1	Q5T601	910 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	FAR1	Q8WVX9	515 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	MARVELD3	Q96A59	401 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	MYO19	Q96H55	970 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	TSSK3	Q96PN8	268 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	TTLL2	Q9BWV7	592 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF717	Q9BY31	904 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	MARCH5	Q9NX47	278 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	VNN3	Q9NY84	501 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	NUP50	Q9UKX7	468 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	DLGAP4	Q9Y2H0	992 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	NAALAD2	Q9Y3Q0	740 aa		13.61	□□□□□ -0.23
ABCF3-210	ENST00000473311	PER2	O15055	1255 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	FZD6	O60353	706 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	FAM189B	P81408	668 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	FAM109A	Q8N4B1	249 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	GLMN	Q92990	594 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	WBP2	Q969T9	261 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	PLD4	Q96BZ4	506 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	INPP5K	Q9BT40	448 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	NTMT1	Q9BV86	223 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ARHGAP39	Q9C0H5	1083 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZFYVE1	Q9HBF4	777 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	CRLS1	Q9UJA2	301 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	FBXO10	Q9UK96	956 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF840P	A6NDX5	716 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	MYO1G	B0I1T2	1018 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311		M0R3G1	203 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	GAPDHS	O14556	408 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	STK16	O75716	305 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	RPS3	P23396	243 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	CCND3	P30281	292 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	GRK3	P35626	688 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	SLC11A1	P49279	550 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	NFATC2	Q13469	925 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	IL18R1	Q13478	541 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF181	Q2M3W8	571 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	CALHM3	Q86XJ0	350 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	RASAL3	Q86YV0	1011 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	MFSD4A	Q8N468	514 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	UQCC2	Q9BRT2	126 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ACPT	Q9BZG2	426 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	KCNH6	Q9H252	994 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	ERVK-18	Q9QC07	812 aa		13.6	□□□□□ -0.23
ABCF3-210	ENST00000473311	GLUL	P15104	373 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	MAP2K4	P45985	399 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	FLT3LG	P49771	235 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	GALK2	Q01415	458 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	SMARCB1	Q12824	385 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	CRHR2	Q13324	411 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	CPZ	Q66K79	652 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	ZNF544	Q6NX49	715 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	TAS1R1	Q7RTX1	841 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	SNX20	Q7Z614	316 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	CYP4Z1	Q86W10	505 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	IFNL1	Q8IU54	200 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	SETD9	Q8NE22	299 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	SELENOM	Q8WWX9	145 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	USP7	Q93009	1102 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	BARD1	Q99728	777 aa	Known RBP	13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	GON7	Q9BXV9	100 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	SERHL	Q9NQF3	203 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	TMEM161A	Q9NX61	479 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	ASIC5	Q9NY37	505 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	AFF4	Q9UHB7	1163 aa	Known RBP	13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311	INTS6	Q9UL03	887 aa	Known RBP	13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311		A0A096LPI6	279 aa		13.59	□□□□□ -0.23
ABCF3-210	ENST00000473311		A8MX80	341 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms