RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
TPM3-216ENST00000473036 TMEM164Q5U3C3 297 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 LCN10Q6JVE6 187 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 FBXO42Q6P3S6 717 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 AGTRAPQ6RW13 159 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 VASH2Q86V25 355 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 PPP1R3BQ86XI6 285 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 SYTL1Q8IYJ3 562 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 NKAPQ8N5F7 415 aaKnown RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 GALNT6Q8NCL4 622 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 SMPDL3AQ92484 453 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 TCTN2Q96GX1 697 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 CCDC138Q96M89 665 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 GPR78Q96P69 363 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 OR4K3Q96R72 315 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 RUFY1Q96T51 708 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 INTS7Q9NVH2 962 aaKnown RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 CUEDC1Q9NWM3 386 aaPredicted RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 UTP6Q9NYH9 597 aaKnown RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 TAC3Q9UHF0 121 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 RARRES3Q9UL19 164 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 OR2A25A4D2G3 310 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 STMND1H3BQB6 276 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 TERTO14746 1132 aaKnown RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 TAPBPO15533 448 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 RAD1O60671 282 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 MED26O95402 600 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 GUCA1CO95843 209 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 C2P06681 752 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 CD82P27701 267 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ARL4DP49703 201 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 SERPINB9P50453 376 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 SNRPNP63162 240 aaKnown RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 PRDX1Q06830 199 aaKnown RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 NAE1Q13564 534 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 CSHL1Q14406 222 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 RASA2Q15283 850 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ICE2Q659A1 982 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ZNF425Q6IV72 752 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ISCA2Q86U28 154 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 PAQR7Q86WK9 346 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ISL2Q96A47 359 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 SLC22A18Q96BI1 424 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 PYCR2Q96C36 320 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ZNF285Q96NJ3 590 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 DPH7Q9BTV6 452 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ULBP3Q9BZM4 244 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 STMN4Q9H169 189 aaPredicted RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 SYTL2Q9HCH5 934 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 SNX15Q9NRS6 342 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 ABCF3Q9NUQ8 709 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 NOVA2Q9UNW9 492 aaKnown RBP12.58□□□□□ -0.4
TPM3-216ENST00000473036 OARD1Q9Y530 152 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 PCDHB11Q9Y5F2 797 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
TPM3-216ENST00000473036 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
TPM3-216ENST00000473036 LOC105369274A0A096LPK9 316 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 LOC102723532A0A0G2JNH3 316 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 SHBGP04278 402 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 NPPBP16860 134 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
TPM3-216ENST00000473036 RORAP35398 523 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 HSD17B2P37059 387 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 MSH2P43246 934 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 SLC12A2P55011 1212 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 GPS2Q13227 327 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 FBXO48Q5FWF7 155 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 ZNF385CQ66K41 422 aaPredicted RBP12.57□□□□□ -0.4
TPM3-216ENST00000473036 ATG14Q6ZNE5 492 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 MCATQ8IVS2 390 aaKnown RBP12.57□□□□□ -0.4
TPM3-216ENST00000473036 TMEM151BQ8IW70 566 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 OR4N4Q8N0Y3 316 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 DTWD1Q8N5C7 304 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 ZUFSPQ96AP4 578 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 FBXL8Q96CD0 374 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 NXNL1Q96CM4 212 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 TSPAN17Q96FV3 270 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 ZNF358Q9NW07 568 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms