RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NPEPPSL1A6NEC2 478 aa2.54□□□□□ -2
XRN1-210ENST00000472697 F8WDY8 70 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PES1O00541 588 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 HS3ST1O14792 307 aa2.54□□□□□ -2
XRN1-210ENST00000472697 RASGRF2O14827 1237 aa2.54□□□□□ -2
XRN1-210ENST00000472697 XPO1O14980 1071 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 ANKRD28O15084 1053 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TLX2O43763 284 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 GMFGO60234 142 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CRCPO75575 148 aa2.54□□□□□ -2
XRN1-210ENST00000472697 EPN2O95208 641 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TTLL1O95922 423 aa2.54□□□□□ -2
XRN1-210ENST00000472697 KRT19P08727 400 aa2.54□□□□□ -2
XRN1-210ENST00000472697 KRT5P13647 590 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CKMT2P17540 419 aa2.54□□□□□ -2
XRN1-210ENST00000472697 BMP5P22003 454 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ACP1P24666 158 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SSTR1P30872 391 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PRDX2P32119 198 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CDK3Q00526 305 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ROR2Q01974 943 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 HHEXQ03014 270 aa2.54□□□□□ -2
XRN1-210ENST00000472697 LIPEQ05469 1076 aa2.54□□□□□ -2
XRN1-210ENST00000472697 HSPB3Q12988 150 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PLA2G7Q13093 441 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CDH18Q13634 790 aa2.54□□□□□ -2
XRN1-210ENST00000472697 NONOQ15233 471 aaKnown RBP eCLIP2.54□□□□□ -2
XRN1-210ENST00000472697 PFKFB3Q16875 520 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 SYT16Q17RD7 645 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CCDC40Q4G0X9 1142 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CMPK2Q5EBM0 449 aa2.54□□□□□ -2
XRN1-210ENST00000472697 OR4C11Q6IEV9 310 aa2.54□□□□□ -2
XRN1-210ENST00000472697 PMF1Q6P1K2 205 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CEP85Q6P2H3 762 aa2.54□□□□□ -2
XRN1-210ENST00000472697 NOTUMQ6P988 496 aa2.54□□□□□ -2
XRN1-210ENST00000472697 Q6ZNX1 250 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SLC29A4Q7RTT9 530 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MIER3Q7Z3K6 550 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ODF3L1Q8IXM7 274 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.54□□□□□ -2
XRN1-210ENST00000472697 KDM8Q8N371 416 aa2.54□□□□□ -2
XRN1-210ENST00000472697 GBP7Q8N8V2 638 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 THAP8Q8NA92 274 aa2.54□□□□□ -2
XRN1-210ENST00000472697 TSPAN14Q8NG11 270 aa2.54□□□□□ -2
XRN1-210ENST00000472697 OR6C4Q8NGE1 309 aa2.54□□□□□ -2
XRN1-210ENST00000472697 OR52B4Q8NGK2 314 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SGCDQ92629 289 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ZNF75CPQ92670 426 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 OSTF1Q92882 214 aa2.54□□□□□ -2
XRN1-210ENST00000472697 FBXO32Q969P5 355 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MYEOVQ96EZ4 313 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ERO1AQ96HE7 468 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CXorf58Q96LI9 332 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CAMK1GQ96NX5 476 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SLITRK1Q96PX8 696 aa2.54□□□□□ -2
XRN1-210ENST00000472697 RAB17Q9H0T7 212 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CSTL1Q9H114 145 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SNX25Q9H3E2 840 aa2.54□□□□□ -2
XRN1-210ENST00000472697 YY1AP1Q9H869 796 aa2.54□□□□□ -2
XRN1-210ENST00000472697 VPS37BQ9H9H4 285 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MAP6D1Q9H9H5 199 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SEC61A2Q9H9S3 476 aa2.54□□□□□ -2
XRN1-210ENST00000472697 MEAF6Q9HAF1 191 aa2.54□□□□□ -2
XRN1-210ENST00000472697 ROPN1Q9HAT0 212 aaPredicted RBP2.54□□□□□ -2
XRN1-210ENST00000472697 NOCTQ9UK39 431 aaKnown RBP2.54□□□□□ -2
XRN1-210ENST00000472697 KCNS2Q9ULS6 477 aa2.54□□□□□ -2
XRN1-210ENST00000472697 SNX7Q9UNH6 387 aa2.54□□□□□ -2
XRN1-210ENST00000472697 JRKLQ9Y4A0 524 aa2.54□□□□□ -2
XRN1-210ENST00000472697 CACNA1AO00555 2505 aa2.53□□□□□ -2
XRN1-210ENST00000472697 LY75O60449 1722 aa2.53□□□□□ -2
XRN1-210ENST00000472697 UTYO14607 1347 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SYNJ2BP-COX16A0A087WUM0 186 aa2.53□□□□□ -2
XRN1-210ENST00000472697 A0A087WV48 116 aa2.53□□□□□ -2
XRN1-210ENST00000472697 A0A0U1RQJ8 604 aa2.53□□□□□ -2
XRN1-210ENST00000472697 TRIM49BA6NDI0 452 aa2.53□□□□□ -2
XRN1-210ENST00000472697 C2CD4BA6NLJ0 364 aa2.53□□□□□ -2
XRN1-210ENST00000472697 C2orf81A6NN90 581 aa2.53□□□□□ -2
XRN1-210ENST00000472697 E5RGE8 158 aa2.53□□□□□ -2
XRN1-210ENST00000472697 CLDN4O14493 209 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SDHDO14521 159 aa2.53□□□□□ -2
XRN1-210ENST00000472697 CXCL11O14625 94 aa2.53□□□□□ -2
XRN1-210ENST00000472697 MAP2K7O14733 419 aa2.53□□□□□ -2
XRN1-210ENST00000472697 MAGEB3O15480 346 aa2.53□□□□□ -2
XRN1-210ENST00000472697 CYP27B1O15528 508 aa2.53□□□□□ -2
XRN1-210ENST00000472697 KIF1CO43896 1103 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 ERLIN1O75477 346 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SURF6O75683 361 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 IL1BP01584 269 aa2.53□□□□□ -2
XRN1-210ENST00000472697 OR2T7P0C7T2 308 aa2.53□□□□□ -2
XRN1-210ENST00000472697 PCNAP12004 261 aa2.53□□□□□ -2
XRN1-210ENST00000472697 MPLP40238 635 aa2.53□□□□□ -2
XRN1-210ENST00000472697 FOLR3P41439 243 aa2.53□□□□□ -2
XRN1-210ENST00000472697 PSMC4P43686 418 aa2.53□□□□□ -2
XRN1-210ENST00000472697 NADK2Q4G0N4 442 aa2.53□□□□□ -2
XRN1-210ENST00000472697 MIDNQ504T8 468 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SOWAHCQ53LP3 525 aaPredicted RBP2.53□□□□□ -2
XRN1-210ENST00000472697 FASTKD1Q53R41 847 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 SYT14P1Q58G82 188 aa2.53□□□□□ -2
XRN1-210ENST00000472697 FNDC7Q5VTL7 733 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SIGIRRQ6IA17 410 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms