RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ZNF274Q96GC6 653 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 REXO5Q96IC2 774 aaKnown RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 MAELQ96JY0 434 aaKnown RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 PRICKLE1Q96MT3 831 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 OPALINQ96PE5 141 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 FAM213AQ9BRX8 229 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 SLC17A9Q9BYT1 436 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 ILKAPQ9H0C8 392 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 SNX25Q9H3E2 840 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 KLC4Q9NSK0 619 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 RMND1Q9NWS8 449 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 SAMD15Q9P1V8 674 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 ITGA11Q9UKX5 1188 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 BAG5Q9UL15 447 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 LRP4O75096 1905 aa4.28□□□□□ -1.72
LMNB1-205ENST00000472034 NCOA6Q14686 2063 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-205ENST00000472034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.27□□□□□ -1.736e-10■□□□□ 10.9
LMNB1-205ENST00000472034 TRGV8A0A0C4DH27 118 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PVALEFA0A1B0GWK0 134 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SH3D21A4FU49 640 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 GOLGA8IPA6NC78 632 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 IGLON5A6NGN9 336 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 GOLGA8JA6NMD2 632 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 A8MXQ7 604 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 KPNA3O00505 521 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 AP3D1O14617 1153 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 FPGTO14772 594 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 MSI1O43347 362 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PROM1O43490 865 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 GATCO43716 136 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CIDEAO60543 219 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SEC24DO94855 1032 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 DEXIO95424 95 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 OPN1LWP04000 364 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SRPRAP08240 638 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PDHA1P08559 390 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 LINGO3P0C6S8 592 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 TRIM49P0CI25 452 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 TRIM49CP0CI26 452 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 KRT3P12035 628 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SYT1P21579 422 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ATP5F1P24539 256 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CFPP27918 469 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SERPINB3P29508 390 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 MCM7P33993 719 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PBX1P40424 430 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 NEK3P51956 506 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 HK3P52790 923 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 NDST1P52848 882 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ARFIP1P53367 373 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 TMPRSS15P98073 1019 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 KLC1Q07866 573 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 RIPPLY1Q0D2K3 151 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PIN1Q13526 163 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ZNF235Q14590 738 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 NR1D2Q14995 579 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ELOCQ15369 112 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 KLHL38Q2WGJ6 581 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PIK3R6Q5UE93 754 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 FOXR2Q6PJQ5 311 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CHD1LQ86WJ1 897 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ZNF761Q86XN6 746 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CFAP52Q8N1V2 620 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 C12orf29Q8N999 325 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CHST14Q8NCH0 376 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 FAM46DQ8NEK8 389 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ZNF680Q8NEM1 530 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 OR56B2PQ8NGI1 322 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CALML6Q8TD86 181 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SLC2A14Q8TDB8 520 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ADAMTS18Q8TE60 1221 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 GRK7Q8WTQ7 553 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PATE1Q8WXA2 126 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 OR8D1Q8WZ84 308 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 AZIN2Q96A70 460 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ARL8AQ96BM9 186 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ZBTB8AQ96BR9 441 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PDXPQ96GD0 296 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SMARCD1Q96GM5 515 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 METTL2AQ96IZ6 378 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 RADILQ96JH8 1075 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 CLIC6Q96NY7 704 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 MED15Q96RN5 788 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 NDNQ99608 321 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SMAD5Q99717 465 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 BDH2Q9BUT1 245 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ULBP3Q9BZM4 244 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 PITHD1Q9GZP4 211 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 ENKD1Q9H0I2 346 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 FBXO44Q9H4M3 255 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 STN1Q9H668 368 aaKnown RBP4.27□□□□□ -1.73
LMNB1-205ENST00000472034 SMYD3Q9H7B4 428 aa4.27□□□□□ -1.73
LMNB1-205ENST00000472034 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms