RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 UNC5DQ6UXZ4 953 aa18■□□□□ 0.47
SORT1-203ENST00000471996 TMEM178AQ8NBL3 297 aa18■□□□□ 0.47
SORT1-203ENST00000471996 STYXQ8WUJ0 223 aa18■□□□□ 0.47
SORT1-203ENST00000471996 NINJ1Q92982 152 aa18■□□□□ 0.47
SORT1-203ENST00000471996 IQCDQ96DY2 449 aa18■□□□□ 0.47
SORT1-203ENST00000471996 MIPEPQ99797 713 aa18■□□□□ 0.47
SORT1-203ENST00000471996 UTP23Q9BRU9 249 aaKnown RBP18■□□□□ 0.47
SORT1-203ENST00000471996 RAB11FIP5Q9BXF6 653 aa18■□□□□ 0.47
SORT1-203ENST00000471996 KCNN3Q9UGI6 736 aa18■□□□□ 0.47
SORT1-203ENST00000471996 MKL2Q9ULH7 1088 aa18■□□□□ 0.47
SORT1-203ENST00000471996 hCG_1818297A0A087WSY0 165 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 H7C0C1 242 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 C8orf89P0DMQ9 161 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 COMTP21964 271 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 PSMB5P28074 263 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 CCR7P32248 378 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 ATP5OP48047 213 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 FOLH1Q04609 750 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 HSPA14Q0VDF9 509 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 ASTE1Q2TB18 679 aaPredicted RBP17.99■□□□□ 0.47
SORT1-203ENST00000471996 CES4AQ5XG92 561 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 FCRLBQ6BAA4 426 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 PLAG1Q6DJT9 500 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 FBXO42Q6P3S6 717 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 FGD2Q7Z6J4 655 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 RHOT2Q8IXI1 618 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 TAB3Q8N5C8 712 aaPredicted RBP17.99■□□□□ 0.47
SORT1-203ENST00000471996 FAM98AQ8NCA5 519 aaKnown RBP17.99■□□□□ 0.47
SORT1-203ENST00000471996 OR2L3Q8NG85 312 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 LILRB4Q8NHJ6 448 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 ASB5Q8WWX0 329 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 MMABQ96EY8 250 aaPredicted RBP17.99■□□□□ 0.47
SORT1-203ENST00000471996 ZFYVE21Q9BQ24 234 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 DLL4Q9NR61 685 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
SORT1-203ENST00000471996 ANKRD10Q9NXR5 420 aa17.99■□□□□ 0.47
SORT1-203ENST00000471996 ACANP16112 2415 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 F8W8V4 182 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 H0YGG7 62 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 SPOPO43791 374 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 OR1I1O60431 355 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 GPC4O75487 556 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 SEC24DO94855 1032 aaPredicted RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 MSNP26038 577 aaKnown RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 ARF3P61204 181 aaPredicted RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 FOXD4Q12950 439 aaPredicted RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 BTBD16Q32M84 506 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 GALNTL5Q7Z4T8 443 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 ZC3H7AQ8IWR0 971 aaKnown RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 ASZ1Q8WWH4 475 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 PPP1R2P1Q96PQ5 205 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 FERMT1Q9BQL6 677 aa17.98■□□□□ 0.47
SORT1-203ENST00000471996 RPH3AQ9Y2J0 694 aaPredicted RBP17.98■□□□□ 0.47
SORT1-203ENST00000471996 IGHV3-20A0A0C4DH32 117 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 OR2A25A4D2G3 310 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 OR51F1A6NGY5 319 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 PSTPIP1O43586 416 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 TOXO94900 526 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 GYPCP04921 128 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 ANXA5P08758 320 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 FOSL1P15407 271 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 TPH1P17752 444 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 PSMA3P25788 255 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 MSX1P28360 303 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 FOXN2P32314 431 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 ST13P50502 369 aaKnown RBP17.97■□□□□ 0.47
SORT1-203ENST00000471996 FASTKQ14296 549 aaKnown RBP17.97■□□□□ 0.47
SORT1-203ENST00000471996 MEP1AQ16819 746 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 CLEC17AQ6ZS10 378 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 CRLF3Q8IUI8 442 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 KLHDC8BQ8IXV7 354 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 OR2A1Q8NGT9 310 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 HMGCLL1Q8TB92 370 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 METTL21AQ8WXB1 218 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 UCK2Q9BZX2 261 aa17.97■□□□□ 0.47
SORT1-203ENST00000471996 RUVBL1Q9Y265 456 aaKnown RBP17.97■□□□□ 0.47
SORT1-203ENST00000471996 NKX2-6A6NCS4 301 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 APOC2P02655 101 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 SP1P08047 785 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 HOXD4P09016 255 aaPredicted RBP17.96■□□□□ 0.47
SORT1-203ENST00000471996 CHRNB4P30926 498 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 POU6F1Q14863 301 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 SYT16Q17RD7 645 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 GARNL3Q5VVW2 1013 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 SLC25A25Q6KCM7 469 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 TTC23LQ6PF05 361 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 BBS12Q6ZW61 710 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 CPEB2Q7Z5Q1 589 aaKnown RBP17.96■□□□□ 0.47
SORT1-203ENST00000471996 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 MARVELD2Q8N4S9 558 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 CSNK1A1LQ8N752 337 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 RAD51AP1Q96B01 352 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 LRRC45Q96CN5 670 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 ALS2CR12Q96Q35 445 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 NPAS2Q99743 824 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
SORT1-203ENST00000471996 KCNK13Q9HB14 408 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms