RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ARMC5Q96C12 935 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 NRBF2Q96F24 287 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 DTD2Q96FN9 168 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 FBXL20Q96IG2 436 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 MAGED4Q96JG8 741 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 COQ10AQ96MF6 247 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 TBCDQ9BTW9 1192 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 EFCAB11Q9BUY7 163 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 ING2Q9H160 280 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 MBD1Q9UIS9 605 aaPredicted RBP10.3□□□□□ -0.76
APLF-204ENST00000471727 PPT2Q9UMR5 302 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 WNT6Q9Y6F9 365 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 V9GYQ6 96 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 HELZP42694 1942 aaKnown RBP10.3□□□□□ -0.76
APLF-204ENST00000471727 CEP350Q5VT06 3117 aa10.3□□□□□ -0.76
APLF-204ENST00000471727 OR2AG2A6NM03 316 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 MAGEB17A8MXT2 336 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 H3BM21 787 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CLIC1O00299 241 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 FOXE1O00358 373 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 FPGTO14772 594 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TSPAN6O43657 245 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 DPM1O60762 260 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PRAMEF4O60810 478 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 MTX2O75431 263 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 SEC24DO94855 1032 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 SERPINA1P01009 418 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CTSLP07711 333 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 ABCB1P08183 1280 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 COX7A2P14406 83 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TACR1P25103 407 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 ITGB7P26010 798 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 SLC5A2P31639 672 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 HPCAL1P37235 193 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 GABARAPL2P60520 117 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 GRSF1Q12849 480 aaKnown RBP eCLIP10.29□□□□□ -0.76
APLF-204ENST00000471727 GTF2H3Q13889 308 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 EIF4HQ15056 248 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 HIST2H2ACQ16777 129 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PYCR3Q53H96 274 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PAGE2BQ5JRK9 111 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 LRRC73Q5JTD7 316 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 BROXQ5VW32 411 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PRAMEF9Q5VWM5 478 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 HIST2H2AA3Q6FI13 130 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 OR4F3Q6IEY1 312 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CAPN13Q6MZZ7 669 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 ZNF773Q6PK81 442 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 DOK6Q6PKX4 331 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TBPL2Q6SJ96 375 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 DNAJC14Q6Y2X3 702 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 CPA6Q8N4T0 437 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NAT16Q8N8M0 369 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NETO1Q8TDF5 533 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NUDT8Q8WV74 236 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 UBE2E3Q969T4 207 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 WDR34Q96EX3 536 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 C11orf24Q96F05 449 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 PPP1R16AQ96I34 528 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 LINC00615Q96LM1 132 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 PANX1Q96RD7 426 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NPLQ9BXD5 320 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 ASPSCR1Q9BZE9 553 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 REXO4Q9GZR2 422 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 GABARAPL1Q9H0R8 117 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 EHD1Q9H4M9 534 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 SGK2Q9HBY8 427 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TM9SF3Q9HD45 589 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 ITM2CQ9NQX7 267 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 FAM118AQ9NWS6 357 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 GPR34Q9UPC5 381 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 TSC22D4Q9Y3Q8 395 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PCDHB11Q9Y5F2 797 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 HSPE1-MOB4S4R3N1 261 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PLXNB3Q9ULL4 1909 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 EDDM13A0A1B0GTR0 161 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 A0A1B0GTW7 788 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 C5orf67F2Z3F1 127 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 SCAMP2O15127 329 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 SLC16A6O15403 523 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TLL1O43897 1013 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 SCN2BO60939 215 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 E2F6O75461 281 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NFATC1O95644 943 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 MT-ND1P03886 318 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CYP17A1P05093 508 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 PCNAP12004 261 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 NELFEP18615 380 aaKnown RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 DCTP40126 519 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CTSCP53634 463 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 CDH15P55291 814 aa10.29□□□□□ -0.76
APLF-204ENST00000471727 TPD52P55327 224 aaPredicted RBP10.29□□□□□ -0.76
APLF-204ENST00000471727 PHEXP78562 749 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms