RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ADH6P28332 368 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 FOXN2P32314 431 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CYLC1P35663 651 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 NAP1L1P55209 391 aaKnown RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 FOXL2P58012 376 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 HSPA14Q0VDF9 509 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CDH17Q12864 832 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 MUM1Q2TAK8 710 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 VWA2Q5GFL6 755 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 KCTD11Q693B1 232 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 FIGLAQ6QHK4 219 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 BNC2Q6ZN30 1099 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 COX15Q7KZN9 410 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 NDUFAF7Q7L592 441 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 BTLAQ7Z6A9 289 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CCDC170Q8IYT3 715 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 ZNF808Q8N4W9 903 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 DNAJB8Q8NHS0 232 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 MAGEC3Q8TD91 643 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 RAD51AP1Q96B01 352 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 FOPNLQ96NB1 174 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 ZNF285Q96NJ3 590 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PANX3Q96QZ0 392 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 C14orf105Q9NVL8 296 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 RIC8BQ9NVN3 520 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 UTP6Q9NYH9 597 aaKnown RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 IMPACTQ9P2X3 320 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 TEKT2Q9UIF3 430 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 ANAPC5Q9UJX4 755 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 C3orf18Q9UK00 162 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PCDHA3Q9Y5H8 950 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 PRSS21Q9Y6M0 314 aa8.71□□□□□ -1.02
CPSF4-211ENST00000471455 SNRNP200O75643 2136 aaKnown RBP8.71□□□□□ -1.02
CPSF4-211ENST00000471455 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TRGV8A0A0C4DH27 118 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 CCDC162PA2VCL2 907 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 KPNA5O15131 536 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PRMT3O60678 531 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 VPS26AO75436 327 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 BMP10O95393 424 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 ZGLP1P0C6A0 271 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TPBGLP0DKB5 382 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 ICAM2P13598 275 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PRF1P14222 555 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 CCNFP41002 786 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 OR1D4P47884 311 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TNFSF10P50591 281 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
CPSF4-211ENST00000471455 VSX2P58304 361 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PRAMEP78395 509 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 KLC1Q07866 573 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 LONRF1Q17RB8 773 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 FASTKD1Q53R41 847 aaKnown RBP8.7□□□□□ -1.02
CPSF4-211ENST00000471455 WASHC2DQ5SRD0 308 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TMEM207Q6UWW9 146 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PPP1R21Q6ZMI0 780 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 MRGPRGQ86SM5 289 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 TAX1BP1Q86VP1 789 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 METTL27Q8N6F8 245 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-211ENST00000471455 LINC01555Q8NAE3 123 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 CFAP61Q8NHU2 1237 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 STT3BQ8TCJ2 826 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 SKA2Q8WVK7 121 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-211ENST00000471455 HAS2Q92819 552 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PEX13Q92968 403 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 MVB12AQ96EY5 273 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 CARD6Q9BX69 1037 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 RNF32Q9H0A6 362 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 ABI3Q9P2A4 366 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PTGFRNQ9P2B2 879 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 RIMKLBQ9ULI2 386 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 KLHL20Q9Y2M5 609 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PCDHA13Q9Y5I0 950 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 PKDREJQ9NTG1 2253 aa8.7□□□□□ -1.02
CPSF4-211ENST00000471455 MYO7BQ6PIF6 2116 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 IGLV3-12A0A075B6K2 115 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 A0A1W2PQ72 361 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 OR51F1A6NGY5 319 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 E7EVH7 732 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 RASAL1O95294 804 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 GOT2P00505 430 aaKnown RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 ANXA5P08758 320 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 PRR35P0CG20 571 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 MCM3P25205 808 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 HTR1EP28566 365 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 CMPK1P30085 196 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 CCR7P32248 378 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 GRIA3P42263 894 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 TTPAP49638 278 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 TDGF1P3P51864 188 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 SMSP52788 366 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 EMP2P54851 167 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 KCNK10P57789 538 aa8.69□□□□□ -1.02
CPSF4-211ENST00000471455 ZNF324BQ6AW86 544 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 PTRHD1Q6GMV3 140 aaKnown RBP8.69□□□□□ -1.02
CPSF4-211ENST00000471455 NAPRTQ6XQN6 538 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms