RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 CLCN4P51793 760 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TRA2BP62995 288 aaKnown RBP1.53□□□□□ -2.16
COMMD3-209ENST00000471350 HSPB3Q12988 150 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TRIM29Q14134 588 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TMEM132DQ14C87 1099 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 C15orf59Q2T9L4 293 aaPredicted RBP1.53□□□□□ -2.16
COMMD3-209ENST00000471350 UGT3A2Q3SY77 523 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 RNLSQ5VYX0 342 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 JAKMIP3Q5VZ66 844 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 FAAH2Q6GMR7 532 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TMUB2Q71RG4 321 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 ARHGAP22Q7Z5H3 698 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 CEP57Q86XR8 500 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TTC39CQ8N584 583 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 THAP8Q8NA92 274 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 NOA1Q8NC60 698 aaKnown RBP1.53□□□□□ -2.16
COMMD3-209ENST00000471350 NSMAFQ92636 917 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 FAM20AQ96MK3 541 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 TIGD1Q96MW7 591 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 CDRT15Q96T59 188 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 PRRG4Q9BZD6 226 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 ADNPQ9H2P0 1102 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 SYNCQ9H7C4 482 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 NLGN3Q9NZ94 848 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 NYAP2Q9P242 653 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 ABCD2Q9UBJ2 740 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 GTF3C4Q9UKN8 822 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 ELF5Q9UKW6 265 aaPredicted RBP1.53□□□□□ -2.16
COMMD3-209ENST00000471350 STYXL1Q9Y6J8 313 aa1.53□□□□□ -2.16
COMMD3-209ENST00000471350 RUSC2Q8N2Y8 1516 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 F5H0A9 414 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PDHXO00330 501 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 SNAP91O60641 907 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 IGHV2-70P01814 119 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 HAPLN1P10915 354 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 GP1BBP13224 206 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 BCL3P20749 454 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 SAT1P21673 171 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PTPN3P26045 913 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PKLRP30613 574 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PPIAP62937 165 aaKnown RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 MAT1AQ00266 395 aaKnown RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 EIF4EBP2Q13542 120 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 IGSF11Q5DX21 431 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 RNASEH2BQ5TBB1 312 aaKnown RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 GARNL3Q5VVW2 1013 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 MFSD12Q6NUT3 480 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 Q6ZVH6 145 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 TIPARPQ7Z3E1 657 aaKnown RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 KRTAP11-1Q8IUC1 163 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 MMD2Q8IY49 270 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PRR22Q8IZ63 422 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 RYBPQ8N488 228 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 OR4K1Q8NGD4 311 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 AGAP11Q8TF27 550 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 ATL1Q8WXF7 558 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 HDAC2Q92769 488 aaKnown RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 SPDL1Q96EA4 605 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 TLE6Q9H808 572 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 EQTNQ9NQ60 294 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 ANAPC11Q9NYG5 84 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 SUCLA2Q9P2R7 463 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 THAP10Q9P2Z0 257 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 FBXO2Q9UK22 296 aaPredicted RBP1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PRDM4Q9UKN5 801 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PADI2Q9Y2J8 665 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 TMED3Q9Y3Q3 217 aa1.52□□□□□ -2.17
COMMD3-209ENST00000471350 PGPEP1LA6NFU8 196 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 NEMP2A6NFY4 417 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 H0Y9J4 135 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 J3KRW8 73 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 FPGTO14772 594 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 VILLO15195 856 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PHF1O43189 567 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PAPSS1O43252 624 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 LRCH4O75427 683 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 MTRF1O75570 445 aaKnown RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 MBD4O95243 580 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 LY6G6DO95868 133 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 ANPEPP15144 967 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TM4SF1P30408 202 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 DCDC1P59894 354 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 MPP1Q00013 466 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 FKBP3Q00688 224 aaKnown RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TRAP1Q12931 704 aaKnown RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 RUNX3Q13761 415 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 KIAA0141Q14154 515 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 ZNF146Q15072 292 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 EXT1Q16394 746 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 MCMDC2Q4G0Z9 681 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PRR30Q53SZ7 412 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 HSP90AB4PQ58FF6 505 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 RAB41Q5JT25 222 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 SPECC1Q5M775 1068 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PLEKHS1Q5SXH7 462 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 AGAP7PQ5VUJ5 663 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 OR4A47Q6IF82 309 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TMPRSS11BQ86T26 416 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 AACSQ86V21 672 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 RPAP2Q8IXW5 612 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms